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contig_metadata

20 rows where bioproject = "PRJNA1248471" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 20 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1248471 · 20 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1051967 1051967 PRJNA1248471_S_NODE_2041_length_329_cov_1.914286_g1941_i0 PRJNA1248471 2041 329 1.914286 6.29800094 Tobamovirus 12234 Viruses Viruses 597 3.169999999999999e-166   NTclustered gi|2701262864|gb|PP481220.1| 12253 g1941 i0 99.392 86.4437689969605 329 2 100 0 1 329 6007 6335 Tomato mosaic virus isolate INIFAP JM3, complete genome blastn 28440 597 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tomatotessellati
1051976 1051976 PRJNA1248471_S_NODE_24941_length_152_cov_2.475728_g24841_i0 PRJNA1248471 24941 152 2.475728 3.76310656 Tobamovirus 12234 Viruses Viruses 281 1.46e-71   NTclustered gi|323404090|gb|HQ593616.1| 12253 g24841 i0 100 63.0657894736842 152 0 100 0 1 152 448 599 Tomato mosaic virus isolate TMV-Jahrum coat protein (CP) mRNA, complete cds blastn 9586 281 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tomatotessellati
5457086 5457086 PRJNA1248471_S_NODE_685_length_440_cov_4.171355_g607_i0 PRJNA1248471 685 440 4.171355 18.353962 Tobamovirus maculatessellati 3432877 Viruses Viruses 802 0   NTclustered gi|756420392|gb|KP202857.1| 1391702 g607 i0 99.545 99.1159090909091 440 2 100 0 1 440 1378 939 Tomato mottle mosaic virus isolate 10-100, complete genome blastn 43611 802 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus maculatessellati
6731283 6731283 PRJNA1248471_S_NODE_106_length_1422_cov_6.335761_g105_i0 PRJNA1248471 106 1422 6.335761 90.09452142 Tobamovirus maculatessellati 3432877 Viruses Viruses 2571 0   NTclustered gi|2463200722|gb|ON987481.1| 1391702 g105 i0 99.645 97.9345991561181 1407 5 99 0 16 1422 4641 6047 Tomato mottle mosaic virus isolate NPPO-NL 41979438 RdRp, small replicase subunit, MP, and CP genes, complete cds blastn 139263 2571 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus maculatessellati
6731425 6731425 PRJNA1248471_S_NODE_3946_length_277_cov_1.679825_g3846_i0 PRJNA1248471 3946 277 1.679825 4.65311525 Tobamovirus tomatotessellati 3432892 Viruses Viruses 507 4.53e-139   NTclustered gi|2201440261|gb|OL652662.1| 12253 g3846 i0 99.639 100 277 1 100 0 1 277 3300 3024 Tomato mosaic virus isolate NVWA36783860, complete genome blastn 27700 507 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tomatotessellati
6731467 6731467 PRJNA1248471_S_NODE_86_length_2794_cov_4.997086_g85_i0 PRJNA1248471 86 2794 4.997086 139.61858284 Tobamovirus maculatessellati 3432877 Viruses Viruses 5036 0   NTclustered gi|2429409117|gb|ON146334.1| 1391702 g85 i0 99.388 99.5619183965641 2779 16 99 1 1 2778 1369 4147 Tomato mottle mosaic virus isolate MZWD RNA-dependent RNA polymerase, 126 kDa protein, movement protein, and coat protein genes, complete cds blastn 278176 5036 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus maculatessellati
10557740 10557740 PRJNA1248471_S_NODE_2089_length_327_cov_2.219424_g1989_i0 PRJNA1248471 2089 327 2.219424 7.25751648 Tobamovirus tomatotessellati 3432892 Viruses Viruses 516 9.07e-142   NTclustered gi|2201440261|gb|OL652662.1| 12253 g1989 i0 98.958 88.085626911315 288 3 88 0 1 288 681 394 Tomato mosaic virus isolate NVWA36783860, complete genome blastn 28804 516 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tomatotessellati
10557823 10557823 PRJNA1248471_S_NODE_829_length_414_cov_6.983562_g749_i0 PRJNA1248471 829 414 6.983562 28.91194668 Tobamovirus maculatessellati 3432877 Viruses Viruses 763 0   NTclustered gi|2429409117|gb|ON146334.1| 1391702 g749 i0 100 35.4734299516908 413 0 99 0 1 413 413 1 Tomato mottle mosaic virus isolate MZWD RNA-dependent RNA polymerase, 126 kDa protein, movement protein, and coat protein genes, complete cds blastn 14686 763 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus maculatessellati
12530591 12530591 PRJNA1248471_S_NODE_1030_length_387_cov_4.363905_g945_i0 PRJNA1248471 1030 387 4.363905 16.88831235 Tobamovirus 12234 Viruses Viruses 710 0   NTclustered gi|2201440261|gb|OL652662.1| 12253 g945 i0 99.742 99.2609819121447 387 1 100 0 1 387 4075 4461 Tomato mosaic virus isolate NVWA36783860, complete genome blastn 38414 710 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tomatotessellati
13107467 13107467 PRJNA1248471_S_NODE_1351_length_361_cov_2.657051_g1256_i0 PRJNA1248471 1351 361 2.657051 9.59195411 Tobamovirus tomatotessellati 3432892 Viruses Viruses 667 0   NTclustered gi|2201440261|gb|OL652662.1| 12253 g1256 i0 100 99.9501385041551 361 0 100 0 1 361 2689 3049 Tomato mosaic virus isolate NVWA36783860, complete genome blastn 36082 667 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tomatotessellati
16930846 16930846 PRJNA1248471_S_NODE_18634_length_167_cov_0.864407_g18534_i0 PRJNA1248471 18634 167 0.864407 1.44355969 Tobamovirus maculatessellati 3432877 Viruses Viruses 254 3.58e-63   NTclustered gi|756420392|gb|KP202857.1| 1391702 g18534 i0 94.048 39.2335329341317 168 9 100 1 1 167 5251 5418 Tomato mottle mosaic virus isolate 10-100, complete genome blastn 6552 254 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus maculatessellati
16930936 16930936 PRJNA1248471_S_NODE_714_length_435_cov_4.305699_g636_i0 PRJNA1248471 714 435 4.305699 18.72979065 Tobamovirus tomatotessellati 3432892 Viruses Viruses 804 0   NTclustered gi|2201440261|gb|OL652662.1| 12253 g636 i0 100 99.7287356321839 435 0 100 0 1 435 4826 4392 Tomato mosaic virus isolate NVWA36783860, complete genome blastn 43382 804 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tomatotessellati
16930958 16930958 PRJNA1248471_S_NODE_9474_length_206_cov_1.121019_g9374_i0 PRJNA1248471 9474 206 1.121019 2.30929914 Tobamovirus maculatessellati 3432877 Viruses Viruses 370 4.38e-98   NTclustered gi|537711871|ref|NC_022230.1| 1391702 g9374 i0 99.029 31.7087378640777 206 2 100 0 1 206 743 538 Tomato mottle mosaic virus isolate MX5, complete genome blastn 6532 370 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus maculatessellati
17629750 17629750 PRJNA1248471_S_NODE_2534_length_312_cov_2.429658_g2434_i0 PRJNA1248471 2534 312 2.429658 7.58053296 Tobamovirus 12234 Viruses Viruses 571 1.81e-158   NTclustered gi|2201440261|gb|OL652662.1| 12253 g2434 i0 99.679 99.900641025641 312 1 100 0 1 312 822 1133 Tomato mosaic virus isolate NVWA36783860, complete genome blastn 31169 571 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tomatotessellati
18205384 18205384 PRJNA1248471_S_NODE_355_length_518_cov_4.761194_g324_i0 PRJNA1248471 355 518 4.761194 24.66298492 Tobamovirus tomatotessellati 3432892 Viruses Viruses 878 0   NTclustered gi|2201440261|gb|OL652662.1| 12253 g324 i0 99.381 105.84749034749 485 2 98 1 13 497 3888 3405 Tomato mosaic virus isolate NVWA36783860, complete genome blastn 54829 878 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tomatotessellati
21453832 21453832 PRJNA1248471_S_NODE_217_length_645_cov_5.958054_g203_i0 PRJNA1248471 217 645 5.958054 38.4294483 Tobamovirus 12234 Viruses Viruses 1157 0   NTclustered gi|2201440261|gb|OL652662.1| 12253 g203 i0 99.684 97.9410852713178 632 2 98 0 1 632 5606 4975 Tomato mosaic virus isolate NVWA36783860, complete genome blastn 63172 1157 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tomatotessellati
23305901 23305901 PRJNA1248471_S_NODE_13319_length_188_cov_1.230216_g13219_i0 PRJNA1248471 13319 188 1.230216 2.31280608 Tobamovirus maculatessellati 3432877 Viruses Viruses 342 8.539999999999999e-90   NTclustered gi|756420392|gb|KP202857.1| 1391702 g13219 i0 99.468 46.2925531914894 188 1 100 0 1 188 734 921 Tomato mottle mosaic virus isolate 10-100, complete genome blastn 8703 342 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus maculatessellati
23306026 23306026 PRJNA1248471_S_NODE_479_length_479_cov_3.806977_g431_i0 PRJNA1248471 479 479 3.806977 18.23541983 Tobamovirus maculatessellati 3432877 Viruses Viruses 885 0   NTclustered gi|2429409117|gb|ON146334.1| 1391702 g431 i0 100 98.9164926931106 479 0 100 0 1 479 4198 4676 Tomato mottle mosaic virus isolate MZWD RNA-dependent RNA polymerase, 126 kDa protein, movement protein, and coat protein genes, complete cds blastn 47381 885 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus maculatessellati
24580055 24580055 PRJNA1248471_S_NODE_720_length_434_cov_4.815584_g642_i0 PRJNA1248471 720 434 4.815584 20.89963456 Tobamovirus tomatotessellati 3432892 Viruses Viruses 758 0   NTclustered gi|2201440261|gb|OL652662.1| 12253 g642 i0 99.519 94.3202764976959 416 2 96 0 1 416 416 1 Tomato mosaic virus isolate NVWA36783860, complete genome blastn 40935 758 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tomatotessellati
25278080 25278080 PRJNA1248471_S_NODE_100_length_1625_cov_3.886421_g99_i0 PRJNA1248471 100 1625 3.886421 63.15434125 Tobamovirus 12234 Viruses Viruses 2902 0   NTclustered gi|2201440261|gb|OL652662.1| 12253 g99 i0 99.81 96.8683076923077 1580 3 97 0 46 1625 2691 1112 Tomato mosaic virus isolate NVWA36783860, complete genome blastn 157411 2902 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tomatotessellati

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;