RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1248471" and tax_clade = "Metamonada"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA1248471 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27042033 27042033 PRJNA1248471_S_NODE_7222_length_225_cov_0.818182_g7122_i0 PRJNA1248471 7222 225 0.818182 1.8409095 Streblomastix strix 222440 Preaxostyla other_Eukaryota 66.2 3.58e-12   NR KAA6358530.1 222440 g7122 i0 70.8 0.64 48 14 64 0 145 2 2 49 KAA6358530.1 MAG: hypothetical protein EZS28_045943, partial [Streblomastix strix] diamond 144 66.2 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
28968483 28968483 PRJNA1248471_S_NODE_14948_length_180_cov_0.793893_g14848_i0 PRJNA1248471 14948 180 0.793893 1.4290074 Streblomastix strix 222440 Preaxostyla other_Eukaryota 63.2 3.23e-11   NR KAA6358530.1 222440 g14848 i0 74.4 0.716666666666667 43 11 71.7 0 133 5 2 44 KAA6358530.1 MAG: hypothetical protein EZS28_045943, partial [Streblomastix strix] diamond 129 63.2 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;