contig_metadata
12 rows where bioproject = "PRJNA1248424" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6730877 | 6730877 | PRJNA1248424_P_NODE_66566_length_257_cov_5.385870_g60497_i0 | PRJNA1248424 | 66566 | 257 | 5.38587 | 13.8416859 | Bilophila | 35832 | Bacteria | Bacteria | 146 | 4.81e-41 | NR | WP_287546352.1 | 35832 | g60497 | i0 | 96.5 | 0.992217898832685 | 85 | 3 | 99.2 | 0 | 3 | 257 | 71 | 155 | WP_287546352.1 MULTISPECIES: branched-chain amino acid ABC transporter permease [Bilophila] | diamond | 255 | 146 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Bilophila | |||
| 19479278 | 19479278 | PRJNA1248424_P_NODE_71796_length_249_cov_0.875000_g65727_i0 | PRJNA1248424 | 71796 | 249 | 0.875 | 2.17875 | uncultured Mailhella sp. | 1981031 | Bacteria | Bacteria | 161 | 3.59e-35 | NTclustered | gi|2729058701|emb|OZ007001.1| | 1981031 | g65727 | i0 | 81.771 | 13.3052208835341 | 192 | 35 | 77 | 0 | 1 | 192 | 65486 | 65677 | MAG: uncultured Mailhella sp. isolate metabat2_pooled_hifiasm.920 MAG genome assembly, chromosome: 1 | blastn | 3313 | 161 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Mailhella | uncultured Mailhella sp. | ||
| 24579187 | 24579187 | PRJNA1248424_P_NODE_51900_length_299_cov_2.871681_g45832_i0 | PRJNA1248424 | 51900 | 299 | 2.871681 | 8.58632619 | Taurinivorans muris | 2787751 | Bacteria | Bacteria | 267 | 9.12e-67 | NTclustered | gi|2304091556|gb|CP065938.1| | 2787751 | g45832 | i0 | 98.667 | 1.00334448160535 | 150 | 2 | 100 | 0 | 150 | 299 | 1731439 | 1731588 | Taurinivorans muris strain LT0009 chromosome, complete genome | blastn | 300 | 267 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Taurinivorans | Taurinivorans muris | ||
| 27421517 | 27421517 | PRJNA1248424_P_NODE_8963_length_1901_cov_3.346280_g6330_i0 | PRJNA1248424 | 8963 | 1901 | 3.34628 | 63.6127828 | Desulfovermiculus sp. | 2821143 | Bacteria | Bacteria | 52.4 | 9.4e-5 | NR | MFO7876311.1 | 2821143 | g6330 | i0 | 96 | 0.0394529195160442 | 25 | 1 | 3.9 | 0 | 1299 | 1373 | 24 | 48 | MFO7876311.1 hypothetical protein [Desulfovermiculus sp.] | diamond | 75 | 52.4 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfohalobiaceae | Desulfovermiculus | Desulfovermiculus sp. | ||
| 27547537 | 27547537 | PRJNA1248424_P_NODE_47604_length_322_cov_2.634538_g41537_i0 | PRJNA1248424 | 47604 | 322 | 2.634538 | 8.48321236 | Bilophila wadsworthia | 35833 | Bacteria | Bacteria | 100 | 2.96e-25 | NR | MFR7889681.1 | 35833 | g41537 | i0 | 100 | 2.28260869565217 | 49 | 0 | 45.7 | 0 | 149 | 3 | 5 | 53 | MFR7889681.1 HD-GYP domain-containing protein [Bilophila wadsworthia] | diamond | 735 | 100 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Bilophila | Bilophila wadsworthia | ||
| 27610789 | 27610789 | PRJNA1248424_P_NODE_38524_length_387_cov_1.993631_g32465_i0 | PRJNA1248424 | 38524 | 387 | 1.993631 | 7.71535197 | Desulfovermiculus sp. | 2821143 | Bacteria | Bacteria | 44.7 | 0.00346 | NR | MFO7876311.1 | 2821143 | g32465 | i0 | 77.8 | 0.209302325581395 | 27 | 6 | 20.9 | 0 | 286 | 206 | 24 | 50 | MFO7876311.1 hypothetical protein [Desulfovermiculus sp.] | diamond | 81 | 44.7 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfohalobiaceae | Desulfovermiculus | Desulfovermiculus sp. | ||
| 28021350 | 28021350 | PRJNA1248424_P_NODE_80785_length_239_cov_2.204819_g74716_i0 | PRJNA1248424 | 80785 | 239 | 2.204819 | 5.26951741 | Desulfobacteraceae bacterium IS3 | 1934248 | Bacteria | Bacteria | 41.6 | 0.0143 | NR | OQX21802.1 | 1934248 | g74716 | i0 | 42.2 | 0.564853556485356 | 45 | 26 | 56.5 | 0 | 82 | 216 | 2 | 46 | OQX21802.1 MAG: hypothetical protein BWK80_32210 [Desulfobacteraceae bacterium IS3] | diamond | 135 | 41.6 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacteraceae | Desulfobacteraceae bacterium IS3 | |||
| 28273630 | 28273630 | PRJNA1248424_P_NODE_65386_length_261_cov_1.180851_g59317_i0 | PRJNA1248424 | 65386 | 261 | 1.180851 | 3.08202111 | Desulfocapsa sp. | 2066021 | Bacteria | Bacteria | 53.5 | 7.47e-6 | NR | RUM41879.1 | 2066021 | g59317 | i0 | 36.4 | 3.82758620689655 | 88 | 53 | 98.9 | 2 | 1 | 258 | 470 | 556 | RUM41879.1 MAG: hypothetical protein DSY80_08180 [Desulfocapsa sp.] | diamond | 999 | 53.5 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfocapsaceae | Desulfocapsa | Desulfocapsa sp. | ||
| 28684397 | 28684397 | PRJNA1248424_P_NODE_65427_length_261_cov_0.978723_g59358_i0 | PRJNA1248424 | 65427 | 261 | 0.978723 | 2.55446703 | Desulfovibrionaceae bacterium | 2049043 | Bacteria | Bacteria | 43.5 | 0.0249 | NR | MBQ7608481.1 | 2049043 | g59358 | i0 | 34.4 | 0.735632183908046 | 64 | 42 | 73.6 | 0 | 235 | 44 | 167 | 230 | MBQ7608481.1 isoleucine--tRNA ligase [Desulfovibrionaceae bacterium] | diamond | 192 | 43.5 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrionaceae bacterium | |||
| 29757617 | 29757617 | PRJNA1248424_P_NODE_75611_length_245_cov_0.895349_g69542_i0 | PRJNA1248424 | 75611 | 245 | 0.895349 | 2.19360505 | Desulfobacterales bacterium | 2044940 | Bacteria | Bacteria | 43.5 | 0.0207 | NR | MDD3952243.1 | 2044940 | g69542 | i0 | 41.4 | 0.710204081632653 | 58 | 33 | 69.8 | 1 | 215 | 45 | 37 | 94 | MDD3952243.1 type I restriction endonuclease [Desulfobacterales bacterium] | diamond | 174 | 43.5 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacterales bacterium | ||||
| 30421524 | 30421524 | PRJNA1248424_P_NODE_31173_length_489_cov_1.182692_g25130_i0 | PRJNA1248424 | 31173 | 489 | 1.182692 | 5.78336388 | Desulfovermiculus sp. | 2821143 | Bacteria | Bacteria | 50.1 | 6.26e-5 | NR | MFO7876311.1 | 2821143 | g25130 | i0 | 64.3 | 0.257668711656442 | 42 | 11 | 25.8 | 1 | 193 | 68 | 24 | 61 | MFO7876311.1 hypothetical protein [Desulfovermiculus sp.] | diamond | 126 | 50.1 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfohalobiaceae | Desulfovermiculus | Desulfovermiculus sp. | ||
| 31812041 | 31812041 | PRJNA1248424_P_NODE_57737_length_281_cov_1.850962_g51669_i0 | PRJNA1248424 | 57737 | 281 | 1.850962 | 5.20120322 | Desulfovermiculus sp. | 2821143 | Bacteria | Bacteria | 52 | 1.84e-6 | NR | MFO7876311.1 | 2821143 | g51669 | i0 | 96 | 0.266903914590747 | 25 | 1 | 26.7 | 0 | 160 | 86 | 24 | 48 | MFO7876311.1 hypothetical protein [Desulfovermiculus sp.] | diamond | 75 | 52 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfohalobiaceae | Desulfovermiculus | Desulfovermiculus sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;