RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1248424" and tax_phylum = "Duplornaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1248424 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23304231 23304231 PRJNA1248424_P_NODE_14759_length_1251_cov_2.548387_g10363_i0 PRJNA1248424 14759 1251 2.548387 31.88032137 brine shrimp toti-like virus 1 2900477 Viruses Viruses 389 3.6199999999999997e-124   NR UNI73990.1 2900477 g10363 i0 51.1 2.00719424460432 419 187 99.8 3 3 1250 3 406 UNI73990.1 MAG: capsid protein [brine shrimp toti-like virus 1] diamond 2511 389 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   brine shrimp toti-like virus 1
29725874 29725874 PRJNA1248424_P_NODE_5250_length_2645_cov_11.074261_g3826_i0 PRJNA1248424 5250 2645 11.074261 292.91420345 brine shrimp toti-like virus 1 2900477 Viruses Viruses 566 5.47e-186   NR UNI73990.1 2900477 g3826 i0 64.2 0.496786389413989 438 153 49.2 2 2 1303 407 844 UNI73990.1 MAG: capsid protein [brine shrimp toti-like virus 1] diamond 1314 566 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   brine shrimp toti-like virus 1
30515916 30515916 PRJNA1248424_P_NODE_15813_length_1160_cov_2.950322_g11133_i0 PRJNA1248424 15813 1160 2.950322 34.2237352 Lonestar tick totivirus 2080260 Viruses Viruses 86.3 5.25e-14   NR AUX13135.1 2080260 g11133 i0 27.4 1.54396551724138 336 208 84.1 15 183 1157 1104 1414 AUX13135.1 ORF1, partial [Lonestar tick totivirus] diamond 1791 86.3 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Lonestar tick totivirus
31685329 31685329 PRJNA1248424_P_NODE_14517_length_1271_cov_8.217863_g10183_i0 PRJNA1248424 14517 1271 8.217863 104.44903873 Totiviridae sp. 1955172 Viruses Viruses 50.1 0.019   NR WAK77302.1 1955172 g10183 i0 23.8 1.46577498033045 206 146 46.7 5 174 767 245 447 WAK77302.1 MAG: hypothetical protein [Totiviridae sp.] diamond 1863 50.1 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Totiviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;