RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1248424" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1248424 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26883946 26883946 PRJNA1248424_P_NODE_80481_length_241_cov_0.916667_g74412_i0 PRJNA1248424 80481 241 0.916667 2.20916747 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 130 1.85e-33   NR HSD10953.1 2838779 g74412 i0 72.5 1.99170124481328 80 22 99.6 0 241 2 206 285 HSD10953.1 alpha/beta fold hydrolase [Candidatus Binatia bacterium] diamond 480 130 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
28715898 28715898 PRJNA1248424_P_NODE_75687_length_245_cov_0.895349_g69618_i0 PRJNA1248424 75687 245 0.895349 2.19360505 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 43.1 0.0201   NR HUY27910.1 2785449 g69618 i0 36.2 1.66530612244898 47 30 57.6 0 141 1 41 87 HUY27910.1 DUF3501 family protein [Candidatus Binataceae bacterium] diamond 408 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;