contig_metadata
10 rows where bioproject = "PRJNA1248424", tax_kingdom = "Pseudomonadati" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2903840 | 2903840 | PRJNA1248424_P_NODE_61363_length_272_cov_1.291457_g55295_i0 | PRJNA1248424 | 61363 | 272 | 1.291457 | 3.51276304 | Archangium gephyra | 48 | Bacteria | Bacteria | 335 | 2.21e-87 | NTclustered | gi|2809295724|gb|CP102578.1| | 48 | g55295 | i0 | 92.05 | 80.7279411764706 | 239 | 18 | 100 | 1 | 1 | 239 | 10964088 | 10963851 | Archangium gephyra strain SDU49 chromosome, complete genome | blastn | 21958 | 335 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium gephyra | ||
| 6730740 | 6730740 | PRJNA1248424_P_NODE_59306_length_277_cov_1.877451_g53238_i0 | PRJNA1248424 | 59306 | 277 | 1.877451 | 5.20053927 | Corallococcus sp. AB | 1898750 | Bacteria | Bacteria | 101 | 6.03e-26 | NR | WP_233607615.1 | 2316715 | g53238 | i0 | 81.3 | 0.693140794223827 | 64 | 12 | 69.3 | 0 | 277 | 86 | 7 | 70 | WP_233607615.1 hypothetical protein, partial [Corallococcus sp. AB018] | diamond | 192 | 101 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus sp. AB018 | ||
| 13107052 | 13107052 | PRJNA1248424_P_NODE_66971_length_256_cov_2.153005_g60902_i0 | PRJNA1248424 | 66971 | 256 | 2.153005 | 5.5116928 | Archangium violaceum | 83451 | Bacteria | Bacteria | 209 | 1.3e-49 | NTclustered | gi|2619762464|gb|CP137851.1| | 83451 | g60902 | i0 | 81.928 | 0.97265625 | 249 | 43 | 97 | 2 | 1 | 248 | 6776017 | 6776264 | Archangium violaceum strain KYC5002 chromosome, complete genome | blastn | 249 | 209 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium violaceum | ||
| 16930137 | 16930137 | PRJNA1248424_P_NODE_55534_length_287_cov_1.200935_g49466_i0 | PRJNA1248424 | 55534 | 287 | 1.200935 | 3.44668345 | Kofleriaceae bacterium | 2212474 | Bacteria | Bacteria | 165 | 1.19e-46 | NR | HSK01642.1 | 2212474 | g49466 | i0 | 88.4 | 1.98606271777003 | 95 | 11 | 99.3 | 0 | 1 | 285 | 108 | 202 | HSK01642.1 class II fumarate hydratase [Kofleriaceae bacterium] | diamond | 570 | 165 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Kofleriaceae bacterium | ||||
| 27692205 | 27692205 | PRJNA1248424_P_NODE_80864_length_238_cov_2.272727_g74795_i0 | PRJNA1248424 | 80864 | 238 | 2.272727 | 5.40909026 | Bacteria | 2 | Bacteria | Bacteria | 126 | 1.05e-31 | NR | MBA3541565.1 | 2026735 | g74795 | i0 | 69.2 | 2.93697478991597 | 78 | 24 | 98.3 | 0 | 236 | 3 | 382 | 459 | MBA3541565.1 SpoIIE family protein phosphatase [Deltaproteobacteria bacterium] | diamond | 699 | 127 | 0.992125984251969 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 27768830 | 27768830 | PRJNA1248424_P_NODE_77244_length_244_cov_0.888889_g71175_i0 | PRJNA1248424 | 77244 | 244 | 0.888889 | 2.16888916 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 98.6 | 6.91e-22 | NR | MBK6691071.1 | 2026763 | g71175 | i0 | 57.5 | 0.983606557377049 | 80 | 33 | 97.1 | 1 | 4 | 240 | 119 | 198 | MBK6691071.1 hypothetical protein [Myxococcales bacterium] | diamond | 240 | 98.6 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 28178793 | 28178793 | PRJNA1248424_P_NODE_61926_length_270_cov_2.065990_g55857_i0 | PRJNA1248424 | 61926 | 270 | 2.06599 | 5.578173 | Pyxidicoccus xibeiensis | 2906759 | Bacteria | Bacteria | 48.5 | 4.81e-4 | NR | WP_253982693.1 | 2906759 | g55857 | i0 | 54.2 | 0.533333333333333 | 48 | 22 | 53.3 | 0 | 126 | 269 | 1051 | 1098 | WP_253982693.1 DUF924 family protein [Pyxidicoccus xibeiensis] | diamond | 144 | 48.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Pyxidicoccus | Pyxidicoccus xibeiensis | ||
| 28336924 | 28336924 | PRJNA1248424_P_NODE_75866_length_245_cov_0.895349_g69797_i0 | PRJNA1248424 | 75866 | 245 | 0.895349 | 2.19360505 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 43.9 | 0.0142 | NR | MBW2453469.1 | 2026735 | g69797 | i0 | 51.2 | 0.502040816326531 | 41 | 20 | 50.2 | 0 | 127 | 5 | 152 | 192 | MBW2453469.1 hypothetical protein [Deltaproteobacteria bacterium] | diamond | 123 | 43.9 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 32760258 | 32760258 | PRJNA1248424_P_NODE_47600_length_322_cov_2.642570_g41533_i0 | PRJNA1248424 | 47600 | 322 | 2.64257 | 8.5090754 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 63.5 | 1.04e-10 | NR | MEI6704322.1 | 2026735 | g41533 | i0 | 85.7 | 0.326086956521739 | 35 | 5 | 32.6 | 0 | 216 | 320 | 35 | 69 | MEI6704322.1 hypothetical protein [Deltaproteobacteria bacterium] | diamond | 105 | 63.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 32791562 | 32791562 | PRJNA1248424_P_NODE_64460_length_263_cov_1.673684_g58391_i0 | PRJNA1248424 | 64460 | 263 | 1.673684 | 4.40178892 | Archangium sp. | 1872627 | Bacteria | Bacteria | 151 | 1.18e-41 | NR | WP_324960869.1 | 1872627 | g58391 | i0 | 86.2 | 0.992395437262357 | 87 | 12 | 99.2 | 0 | 261 | 1 | 239 | 325 | WP_324960869.1 ABC transporter substrate-binding protein [Archangium sp.] | diamond | 261 | 151 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;