contig_metadata
11 rows where bioproject = "PRJNA1248424" and tax_clade = "core chlorophytes"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8006797 | 8006797 | PRJNA1248424_P_NODE_80187_length_241_cov_0.916667_g74118_i0 | PRJNA1248424 | 80187 | 241 | 0.916667 | 2.20916747 | Chlamydomonas reinhardtii | 3055 | Plants | Plants | 193 | 1.23e-44 | NTclustered | gi|2082252626|ref|XM_001701274.2| | 3055 | g74118 | i0 | 82.533 | 58.3526970954357 | 229 | 31 | 93 | 7 | 18 | 241 | 1782 | 1558 | Chlamydomonas reinhardtii uncharacterized protein (CHLRE_08g372100v5), mRNA | blastn | 14063 | 193 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii | |
| 9281478 | 9281478 | PRJNA1248424_P_NODE_73328_length_247_cov_0.885057_g67259_i0 | PRJNA1248424 | 73328 | 247 | 0.885057 | 2.18609079 | Volvocaceae | 3065 | Plants | Plants | 93.2 | 3.13e-20 | NR | KAG2484242.1 | 47281 | g67259 | i0 | 58 | 4.08097165991903 | 69 | 29 | 83.8 | 0 | 2 | 208 | 310 | 378 | KAG2484242.1 hypothetical protein HYH03_016976 [Edaphochlamys debaryana] | diamond | 1008 | 93.6 | 0.995726495726496 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Edaphochlamys | Edaphochlamys debaryana | ||
| 12530516 | 12530516 | PRJNA1248424_P_NODE_61250_length_272_cov_1.547739_g55182_i0 | PRJNA1248424 | 61250 | 272 | 1.547739 | 4.20985008 | Micractinium tetrahymenae | 2728915 | Plants | Plants | 110 | 1.11e-25 | NR | KAL4425974.1 | 2728915 | g55182 | i0 | 75.3 | 0.805147058823529 | 73 | 18 | 80.5 | 0 | 1 | 219 | 952 | 1024 | KAL4425974.1 hypothetical protein ABPG75_009990 [Micractinium tetrahymenae] | diamond | 219 | 110 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Micractinium | Micractinium tetrahymenae | |
| 19478853 | 19478853 | PRJNA1248424_P_NODE_48876_length_316_cov_1.012346_g42809_i0 | PRJNA1248424 | 48876 | 316 | 1.012346 | 3.19901336 | Raphidocelis subcapitata | 307507 | Plants | Plants | 145 | 4.369999999999999e-42 | NR | GBF93448.1 | 307507 | g42809 | i0 | 71.7 | 1.00632911392405 | 106 | 27 | 98.7 | 2 | 4 | 315 | 35 | 139 | GBF93448.1 ribosomal protein S1 [Raphidocelis subcapitata] | diamond | 318 | 145 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Selenastraceae | Raphidocelis | Raphidocelis subcapitata | |
| 22029938 | 22029938 | PRJNA1248424_P_NODE_69298_length_251_cov_0.865169_g63229_i0 | PRJNA1248424 | 69298 | 251 | 0.865169 | 2.17157419 | Parietochloris pseudoalveolaris | 3102 | Plants | Plants | 52.8 | 0.023 | NTclustered | gi|725650801|ref|NC_025532.1| | 3102 | g63229 | i0 | 100 | 0.111553784860558 | 28 | 0 | 11 | 0 | 172 | 199 | 65055 | 65082 | Ettlia pseudoalveolaris culture-collection UTEX:975 chloroplast, complete genome | blastn | 28 | 52.8 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Trebouxiales | Trebouxiaceae | Parietochloris | Parietochloris pseudoalveolaris | |
| 24579284 | 24579284 | PRJNA1248424_P_NODE_57160_length_283_cov_1.219048_g51092_i0 | PRJNA1248424 | 57160 | 283 | 1.219048 | 3.44990584 | Monoraphidium neglectum | 145388 | Plants | Plants | 126 | 4.96e-32 | NR | XP_013903537.1 | 145388 | g51092 | i0 | 65.9 | 3.6678445229682 | 85 | 29 | 90.1 | 0 | 25 | 279 | 137 | 221 | XP_013903537.1 superoxide dismutase 2 [Monoraphidium neglectum] | diamond | 1038 | 126 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Selenastraceae | Monoraphidium | Monoraphidium neglectum | |
| 27610802 | 27610802 | PRJNA1248424_P_NODE_70464_length_250_cov_0.870056_g64395_i0 | PRJNA1248424 | 70464 | 250 | 0.870056 | 2.17514 | Gonium pectorale | 33097 | Plants | Plants | 101 | 6.11e-23 | NR | KXZ56552.1 | 33097 | g64395 | i0 | 85.7 | 0.672 | 56 | 8 | 67.2 | 0 | 81 | 248 | 1 | 56 | KXZ56552.1 hypothetical protein GPECTOR_1g496 [Gonium pectorale] | diamond | 168 | 101 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Volvocaceae | Gonium | Gonium pectorale | |
| 28670838 | 28670838 | PRJNA1248424_P_NODE_73587_length_247_cov_0.885057_g67518_i0 | PRJNA1248424 | 73587 | 247 | 0.885057 | 2.18609079 | Chlorophyta | 3041 | Plants | Plants | 92.8 | 2.68e-22 | NR | PRW20673.1 | 3076 | g67518 | i0 | 68.8 | 11.2226720647773 | 77 | 24 | 93.5 | 0 | 232 | 2 | 7 | 83 | PRW20673.1 40S ribosomal S25-3 [Chlorella sorokiniana] | diamond | 2772 | 92.8 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Chlorella | Chlorella sorokiniana | |
| 29712272 | 29712272 | PRJNA1248424_P_NODE_71730_length_249_cov_0.875000_g65661_i0 | PRJNA1248424 | 71730 | 249 | 0.875 | 2.17875 | Chlorophyta | 3041 | Plants | Plants | 115 | 2.87e-28 | NR | KAJ9514070.1 | 44745 | g65661 | i0 | 68.3 | 4.93975903614458 | 82 | 26 | 98.8 | 0 | 2 | 247 | 203 | 284 | KAJ9514070.1 hypothetical protein QJQ45_021162 [Haematococcus lacustris] | diamond | 1230 | 116 | 0.991379310344828 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Haematococcaceae | Haematococcus | Haematococcus lacustris | |
| 29789159 | 29789159 | PRJNA1248424_P_NODE_58291_length_280_cov_1.314010_g52223_i0 | PRJNA1248424 | 58291 | 280 | 1.31401 | 3.679228 | Dunaliella salina | 3046 | Plants | Plants | 43.9 | 0.0232 | NR | KAF5827254.1 | 3046 | g52223 | i0 | 40.7 | 0.578571428571429 | 54 | 30 | 57.9 | 1 | 258 | 97 | 632 | 683 | KAF5827254.1 hypothetical protein DUNSADRAFT_1061 [Dunaliella salina] | diamond | 162 | 43.9 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Dunaliellaceae | Dunaliella | Dunaliella salina | |
| 32368214 | 32368214 | PRJNA1248424_P_NODE_33559_length_449_cov_1.582447_g27504_i0 | PRJNA1248424 | 33559 | 449 | 1.582447 | 7.10518703 | Chlorellaceae | 35461 | Plants | Plants | 199 | 2.8499999999999997e-61 | NR | PRW39386.1 | 3076 | g27504 | i0 | 63.7 | 12.6681514476615 | 146 | 53 | 97.6 | 0 | 438 | 1 | 14 | 159 | PRW39386.1 40S ribosomal S3a-2 isoform B [Chlorella sorokiniana] | diamond | 5688 | 199 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Chlorella | Chlorella sorokiniana |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;