contig_metadata
7 rows where bioproject = "PRJNA1248424", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2327257 | 2327257 | PRJNA1248424_P_NODE_55662_length_287_cov_0.869159_g49594_i0 | PRJNA1248424 | 55662 | 287 | 0.869159 | 2.49448633 | Bacteria | 2 | Bacteria | Bacteria | 163 | 6.169999999999999e-47 | NR | MBW8839373.1 | 2026742 | g49594 | i0 | 89.5 | 2.97909407665505 | 95 | 10 | 99.3 | 0 | 285 | 1 | 234 | 328 | MBW8839373.1 DNA-directed RNA polymerase subunit alpha [Gemmatimonadota bacterium] | diamond | 855 | 163 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 2903845 | 2903845 | PRJNA1248424_P_NODE_61683_length_271_cov_1.439394_g55614_i0 | PRJNA1248424 | 61683 | 271 | 1.439394 | 3.90075774 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 298 | 2.89e-76 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g55614 | i0 | 87.356 | 7.46494464944649 | 261 | 31 | 96 | 2 | 12 | 271 | 3443620 | 3443361 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 2023 | 298 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 11831704 | 11831704 | PRJNA1248424_P_NODE_66630_length_257_cov_2.005435_g60561_i0 | PRJNA1248424 | 66630 | 257 | 2.005435 | 5.15396795 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 211 | 3.64e-50 | NTclustered | gi|575461033|gb|CP007129.1| | 861299 | g60561 | i0 | 86.979 | 38.2217898832685 | 192 | 20 | 75 | 5 | 50 | 238 | 752166 | 751977 | Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence | blastn | 9823 | 211 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 27989703 | 27989703 | PRJNA1248424_P_NODE_76905_length_244_cov_0.900585_g70836_i0 | PRJNA1248424 | 76905 | 244 | 0.900585 | 2.1974274 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 115 | 9.63e-32 | NR | HMI48005.1 | 2026741 | g70836 | i0 | 96.6 | 1.45081967213115 | 59 | 2 | 72.5 | 0 | 244 | 68 | 15 | 73 | HMI48005.1 F0F1 ATP synthase subunit epsilon [Gemmatimonadaceae bacterium] | diamond | 354 | 115 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 29283953 | 29283953 | PRJNA1248424_P_NODE_53589_length_292_cov_1.771689_g47521_i0 | PRJNA1248424 | 53589 | 292 | 1.771689 | 5.17333188 | Longimicrobium sp. | 2029185 | Bacteria | Bacteria | 110 | 5.05e-26 | NR | HEU4560514.1 | 2029185 | g47521 | i0 | 74.3 | 0.719178082191781 | 70 | 2 | 55.5 | 1 | 291 | 130 | 363 | 432 | HEU4560514.1 hypothetical protein [Longimicrobium sp.] | diamond | 210 | 110 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobium | Longimicrobium sp. | |
| 32223396 | 32223396 | PRJNA1248424_P_NODE_59338_length_277_cov_1.696078_g53270_i0 | PRJNA1248424 | 59338 | 277 | 1.696078 | 4.69813606 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 147 | 5.919999999999998e-43 | NR | HVX40619.1 | 2026741 | g53270 | i0 | 83.3 | 4.88447653429603 | 90 | 15 | 97.5 | 0 | 275 | 6 | 50 | 139 | HVX40619.1 ribose 5-phosphate isomerase B [Gemmatimonadaceae bacterium] | diamond | 1353 | 147 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 32697160 | 32697160 | PRJNA1248424_P_NODE_65460_length_260_cov_3.647059_g59391_i0 | PRJNA1248424 | 65460 | 260 | 3.647059 | 9.4823534 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 145 | 1.3899999999999999e-40 | NR | HKH82132.1 | 2448054 | g59391 | i0 | 82.4 | 5.85 | 85 | 15 | 98.1 | 0 | 258 | 4 | 141 | 225 | HKH82132.1 SDR family oxidoreductase [Gemmatimonadales bacterium] | diamond | 1521 | 145 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;