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contig_metadata

20 rows where bioproject = "PRJNA1248424" and tax_clade = "Amoebozoa"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 20 ✖

bioproject 1

  • PRJNA1248424 · 20 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2327223 2327223 PRJNA1248424_P_NODE_40162_length_372_cov_1.334448_g34102_i0 PRJNA1248424 40162 372 1.334448 4.96414656 Dictyostelium 5782 Evosea other_Eukaryota 326 1.89e-84   NTclustered gi|7274|emb|X55973.1| 44689 g34102 i0 84.226 87.3118279569892 336 51 90 2 5 339 478 812 D. discoideum EF1-I gene for elongation factor 1 alpha blastn 32480 326 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
6730390 6730390 PRJNA1248424_P_NODE_40506_length_369_cov_1.560811_g34445_i0 PRJNA1248424 40506 369 1.560811 5.75939259 Dictyostelium purpureum 5786 Evosea other_Eukaryota 285 3.18e-72   NTclustered gi|330818907|ref|XM_003291484.1| 5786 g34445 i0 80.811 10.3739837398374 370 65 99 5 2 368 10 376 Dictyostelium purpureum ribosomal protein L10E (DICPUDRAFT_92700), mRNA blastn 3828 285 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
10557564 10557564 PRJNA1248424_P_NODE_81949_length_211_cov_4.391304_g75879_i0 PRJNA1248424 81949 211 4.391304 9.26565144 Dictyostelium discoideum 44689 Evosea other_Eukaryota 154 4.94e-33   NTclustered gi|66826022|ref|XM_641274.1| 352472 g75879 i0 80.788 31.085308056872 203 33 95 5 6 205 200 1 Dictyostelium discoideum AX4 S60 ribosomal protein L36a (rpl36a) mRNA, complete cds blastn 6559 154 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
11831286 11831286 PRJNA1248424_P_NODE_44510_length_340_cov_1.441948_g38446_i0 PRJNA1248424 44510 340 1.441948 4.9026232 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 175 2.6e-52   NR ABL84200.1 5791 g38446 i0 81.4 15.9441176470588 113 21 99.7 0 1 339 17 129 ABL84200.1 14-3-3-like protein [Physarum polycephalum] diamond 5421 176 0.994318181818182 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
20754424 20754424 PRJNA1248424_P_NODE_56397_length_285_cov_1.089623_g50329_i0 PRJNA1248424 56397 285 1.089623 3.10542555 Vannella sp. strain CAZ6/I 325077 Discosea other_Eukaryota 442 1.3399999999999994e-119   NTclustered gi|62865939|gb|AY929914.1| 325077 g50329 i0 95.971 95.0140350877193 273 9 95 2 15 285 1369 1641 Vannella sp. strain CAZ6/I 18S small subunit ribosomal RNA gene, partial sequence blastn 27079 442 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain CAZ6/I
26661804 26661804 PRJNA1248424_P_NODE_71561_length_249_cov_0.875000_g65492_i0 PRJNA1248424 71561 249 0.875 2.17875 Heterostelium album PN5 2086695 Evosea other_Eukaryota 42.7 0.0424   NR XP_020436591.1 670386 g65492 i0 40 0.542168674698795 45 27 54.2 0 249 115 737 781 XP_020436591.1 hypothetical protein PPL_02511 [Heterostelium album PN500] diamond 135 42.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
26693697 26693697 PRJNA1248424_P_NODE_74641_length_246_cov_0.890173_g68572_i0 PRJNA1248424 74641 246 0.890173 2.18982558 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 140 1.69e-38   NR XP_004344609.1 1257118 g68572 i0 79 3.95121951219512 81 17 98.8 0 3 245 199 279 XP_004344609.1 vacuolar protein sortingassociated protein 26, putative [Acanthamoeba castellanii str. Neff] diamond 972 140 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27642499 27642499 PRJNA1248424_P_NODE_77164_length_244_cov_0.900585_g71095_i0 PRJNA1248424 77164 244 0.900585 2.1974274 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 47.4 8.47e-4   NR XP_012753477.1 1410327 g71095 i0 40 0.614754098360656 50 30 61.5 0 151 2 232 281 XP_012753477.1 hypothetical protein SAMD00019534_069110 [Acytostelium subglobosum LB1] diamond 150 47.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
28494889 28494889 PRJNA1248424_P_NODE_42207_length_356_cov_1.431095_g36145_i0 PRJNA1248424 42207 356 1.431095 5.0946982 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 135 1.5499999999999998e-37   NR XP_004334896.1 1257118 g36145 i0 59.1 0.969101123595506 115 45 96.1 2 344 3 1 114 XP_004334896.1 ribosomal protein L6, putative [Acanthamoeba castellanii str. Neff] diamond 345 135 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28747383 28747383 PRJNA1248424_P_NODE_70387_length_250_cov_0.870056_g64318_i0 PRJNA1248424 70387 250 0.870056 2.17514 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 95.5 1.16e-20   NR KAH3744683.1 1580589 g64318 i0 53 4.968 83 39 99.6 0 250 2 1756 1838 KAH3744683.1 hypothetical protein Pelo_13925 [Pelomyxa schiedti] diamond 1242 95.5 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
29789163 29789163 PRJNA1248424_P_NODE_62731_length_268_cov_1.441026_g56662_i0 PRJNA1248424 62731 268 1.441026 3.86194968 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 57 4.9e-7   NR XP_004341507.1 1257118 g56662 i0 41.1 2.00373134328358 90 50 97.4 1 261 1 670 759 XP_004341507.1 ribosomal RNA large subunit methyltransferase J, putative [Acanthamoeba castellanii str. Neff] diamond 537 57 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29902230 29902230 PRJNA1248424_P_NODE_23391_length_709_cov_1.573899_g17558_i0 PRJNA1248424 23391 709 1.573899 11.15894391 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 335 7.52e-113   NR XP_003287614.1 5786 g17558 i0 75 4.98448519040903 236 54 99.9 4 709 2 60 290 XP_003287614.1 calcium-regulated actin-bundling protein [Dictyostelium purpureum] diamond 3534 335 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
30755249 30755249 PRJNA1248424_P_NODE_55494_length_287_cov_1.294393_g49426_i0 PRJNA1248424 55494 287 1.294393 3.71490791 Eumycetozoa 142796 Evosea other_Eukaryota 95.5 5.44e-22   NR KAF2072988.1 133409 g49426 i0 59.3 4.19163763066202 81 33 84.7 0 2 244 17 97 KAF2072988.1 hypothetical protein CYY_005700 [Polysphondylium violaceum] diamond 1203 95.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
30990036 30990036 PRJNA1248424_P_NODE_53054_length_294_cov_2.484163_g46986_i0 PRJNA1248424 53054 294 2.484163 7.30343922 Entamoeba invadens IP1 370355 Evosea other_Eukaryota 42.7 0.0241   NR XP_004261325.1 370355 g46986 i0 53.3 0.306122448979592 30 14 30.6 0 66 155 16 45 XP_004261325.1 hypothetical protein EIN_010500 [Entamoeba invadens IP1] diamond 90 42.7 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
31084699 31084699 PRJNA1248424_P_NODE_55415_length_287_cov_1.439252_g49347_i0 PRJNA1248424 55415 287 1.439252 4.13065324 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 150 1.9899999999999992e-43   NR PRP80408.1 1890364 g49347 i0 74.7 32.7700348432056 95 24 99.3 0 2 286 60 154 PRP80408.1 40S ribosomal protein S9 [Planoprotostelium fungivorum] diamond 9405 150 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31274264 31274264 PRJNA1248424_P_NODE_56375_length_285_cov_1.136792_g50307_i0 PRJNA1248424 56375 285 1.136792 3.2398572 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 108 4.29e-26   NR XP_004341762.1 1257118 g50307 i0 54 3.66315789473684 87 40 91.6 0 269 9 40 126 XP_004341762.1 TolAlike protein [Acanthamoeba castellanii str. Neff] diamond 1044 108 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31893316 31893316 PRJNA1248424_P_NODE_74897_length_246_cov_0.890173_g68828_i0 PRJNA1248424 74897 246 0.890173 2.18982558 Acytosteliaceae 2058183 Evosea other_Eukaryota 105 1.37e-24   NR XP_020438084.1 670386 g68828 i0 55 1.95121951219512 80 36 97.6 0 3 242 272 351 XP_020438084.1 carboxylic ester hydrolase [Heterostelium album PN500] diamond 480 106 0.990566037735849 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
32001838 32001838 PRJNA1248424_P_NODE_67938_length_254_cov_0.861878_g61869_i0 PRJNA1248424 67938 254 0.861878 2.18917012 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 78.2 3e-15   NR XP_004340229.1 1257118 g61869 i0 51.8 5.7755905511811 83 38 95.7 1 252 10 163 245 XP_004340229.1 ribosomal protein L6e, putative [Acanthamoeba castellanii str. Neff] diamond 1467 78.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32033500 32033500 PRJNA1248424_P_NODE_46858_length_326_cov_0.818182_g40791_i0 PRJNA1248424 46858 326 0.818182 2.66727332 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 110 1.44e-25   NR PRP74799.1 1890364 g40791 i0 53.7 1.98773006134969 108 47 99.4 1 3 326 409 513 PRP74799.1 actin binding protein [Planoprotostelium fungivorum] diamond 648 110 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32223386 32223386 PRJNA1248424_P_NODE_51298_length_302_cov_1.912664_g45230_i0 PRJNA1248424 51298 302 1.912664 5.77624528 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 89.4 9.31e-19   NR XP_004341750.1 1257118 g45230 i0 67.2 0.665562913907285 67 21 66.6 1 10 210 85 150 XP_004341750.1 TolAlike protein [Acanthamoeba castellanii str. Neff] diamond 201 89.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;