RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1247234" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1247234 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27831641 27831641 PRJNA1247234_P_NODE_15264_length_288_cov_1.306977_g15108_i0 PRJNA1247234 15264 288 1.306977 3.76409376 Smittium culicis 133412 Fungi Fungi 101 9.2e-23   NR OMJ21272.1 133412 g15108 i0 55.9 0.96875 93 34 89.6 2 259 2 1 93 OMJ21272.1 Aspartyl aminopeptidase [Smittium culicis] diamond 279 101 1 Eukaryota Opisthokonta Fungi Zoopagomycota Harpellomycetes Harpellales Legeriomycetaceae Smittium Smittium culicis
31766755 31766755 PRJNA1247234_P_NODE_27937_length_242_cov_0.923077_g27781_i0 PRJNA1247234 27937 242 0.923077 2.23384634 Smittium 4888 Fungi Fungi 141 2.39e-40   NR OLY83758.1 133383 g27781 i0 83.8 6.94214876033058 80 13 99.2 0 241 2 7 86 OLY83758.1 40S ribosomal protein S17-B, partial [Smittium mucronatum] diamond 1680 141 1 Eukaryota Opisthokonta Fungi Zoopagomycota Harpellomycetes Harpellales Legeriomycetaceae Smittium Smittium mucronatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;