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contig_metadata

34 rows where bioproject = "PRJNA1247234" and tax_phylum = "Synergistota"

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tax_superkingdom 1

tax_phylum 1

  • Synergistota · 34 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1247234 · 34 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1626136 1626136 PRJNA1247234_P_NODE_21222_length_252_cov_0.871508_g21066_i0 PRJNA1247234 21222 252 0.871508 2.19620016 Synergistaceae bacterium 2053624 Bacteria Bacteria 178 1.26e-53   NR MBR4196264.1 2053624 g21066 i0 96.4 9.88095238095238 83 3 98.8 0 251 3 154 236 MBR4196264.1 GDP-L-fucose synthase [Synergistaceae bacterium] diamond 2490 178 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
6729231 6729231 PRJNA1247234_P_NODE_21806_length_251_cov_0.876404_g21650_i0 PRJNA1247234 21806 251 0.876404 2.19977404 Synergistaceae bacterium 2053624 Bacteria Bacteria 68.6 3.28e-11   NR MBQ7151075.1 2053624 g21650 i0 91.7 0.430278884462151 36 3 43 0 110 3 1 36 MBQ7151075.1 Flp pilus assembly complex ATPase component TadA [Synergistaceae bacterium] diamond 108 68.6 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
9279766 9279766 PRJNA1247234_P_NODE_26528_length_244_cov_0.912281_g26372_i0 PRJNA1247234 26528 244 0.912281 2.22596564 Synergistaceae bacterium 2053624 Bacteria Bacteria 176 1.4899999999999999e-52   NR MBQ7152267.1 2053624 g26372 i0 98.8 0.995901639344262 81 1 99.6 0 243 1 164 244 MBQ7152267.1 dTDP-glucose 4,6-dehydratase [Synergistaceae bacterium] diamond 243 176 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
16928631 16928631 PRJNA1247234_P_NODE_20334_length_253_cov_0.866667_g20178_i0 PRJNA1247234 20334 253 0.866667 2.19266751 Synergistaceae bacterium 2053624 Bacteria Bacteria 87.4 1.34e-18   NR MBQ3585974.1 2053624 g20178 i0 86.5 1.23320158102767 52 7 61.7 0 156 1 1 52 MBQ3585974.1 galactose ABC transporter substrate-binding protein [Synergistaceae bacterium] diamond 312 87.4 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
22028149 22028149 PRJNA1247234_P_NODE_20318_length_253_cov_0.866667_g20162_i0 PRJNA1247234 20318 253 0.866667 2.19266751 Synergistaceae bacterium 2053624 Bacteria Bacteria 163 1.1e-45   NR MBQ9433985.1 2053624 g20162 i0 98.8 1.94466403162055 82 1 97.2 0 247 2 238 319 MBQ9433985.1 sodium:alanine symporter family protein [Synergistaceae bacterium] diamond 492 163 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
26598471 26598471 PRJNA1247234_P_NODE_22881_length_249_cov_0.886364_g22725_i0 PRJNA1247234 22881 249 0.886364 2.20704636 Synergistaceae bacterium 2053624 Bacteria Bacteria 152 6.5799999999999985e-43   NR MBR4196791.1 2053624 g22725 i0 89.2 3 83 9 100 0 1 249 183 265 MBR4196791.1 N-acetylglucosamine-6-phosphate deacetylase [Synergistaceae bacterium] diamond 747 152 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
27073553 27073553 PRJNA1247234_P_NODE_18782_length_262_cov_1.238095_g18626_i0 PRJNA1247234 18782 262 1.238095 3.2438089 Synergistaceae bacterium 2053624 Bacteria Bacteria 134 4.8e-35   NR MBQ2616341.1 2053624 g18626 i0 88 1.7175572519084 75 8 85.9 1 226 2 1 74 MBQ2616341.1 replicative DNA helicase [Synergistaceae bacterium] diamond 450 134 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
27768791 27768791 PRJNA1247234_P_NODE_17144_length_274_cov_1.164179_g16988_i0 PRJNA1247234 17144 274 1.164179 3.18985046 Synergistaceae bacterium 2053624 Bacteria Bacteria 137 5.37e-36   NR MBQ7560924.1 2053624 g16988 i0 95.9 0.81021897810219 74 3 81 0 53 274 340 413 MBQ7560924.1 ABC transporter ATP-binding protein [Synergistaceae bacterium] diamond 222 137 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
28021304 28021304 PRJNA1247234_P_NODE_24865_length_246_cov_0.901734_g24709_i0 PRJNA1247234 24865 246 0.901734 2.21826564 Synergistaceae bacterium 2053624 Bacteria Bacteria 148 2.79e-39   NR MBR4195109.1 2053624 g24709 i0 90 2.90243902439024 80 8 97.6 0 245 6 258 337 MBR4195109.1 hypothetical protein [Synergistaceae bacterium] diamond 714 148 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
28084199 28084199 PRJNA1247234_P_NODE_10385_length_337_cov_1.181818_g10229_i0 PRJNA1247234 10385 337 1.181818 3.98272666 Synergistaceae bacterium 2053624 Bacteria Bacteria 61.2 3.18e-8   NR MBQ8692383.1 2053624 g10229 i0 55.8 0.462908011869436 52 22 45.4 1 156 4 9 60 MBQ8692383.1 toprim domain-containing protein [Synergistaceae bacterium] diamond 156 61.2 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
28241973 28241973 PRJNA1247234_P_NODE_23606_length_248_cov_0.891429_g23450_i0 PRJNA1247234 23606 248 0.891429 2.21074392 Synergistaceae bacterium 2053624 Bacteria Bacteria 162 2.7199999999999993e-46   NR MBQ7151756.1 2053624 g23450 i0 98.8 0.991935483870968 82 1 99.2 0 248 3 175 256 MBQ7151756.1 adenylosuccinate synthase [Synergistaceae bacterium] diamond 246 162 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
28841931 28841931 PRJNA1247234_P_NODE_11628_length_323_cov_0.868000_g11472_i0 PRJNA1247234 11628 323 0.868 2.80364 Synergistaceae bacterium 2053624 Bacteria Bacteria 120 1.42e-29   NR MBQ7560924.1 2053624 g11472 i0 76.8 0.761609907120743 82 19 76.2 0 76 321 267 348 MBQ7560924.1 ABC transporter ATP-binding protein [Synergistaceae bacterium] diamond 246 120 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
28873571 28873571 PRJNA1247234_P_NODE_11208_length_327_cov_1.169291_g11052_i0 PRJNA1247234 11208 327 1.169291 3.82358157 Synergistaceae bacterium 2053624 Bacteria Bacteria 220 4.29e-68   NR MBQ7577207.1 2053624 g11052 i0 97.2 4.88073394495413 108 3 99.1 0 326 3 9 116 MBQ7577207.1 tyrosine--tRNA ligase [Synergistaceae bacterium] diamond 1596 220 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
28873576 28873576 PRJNA1247234_P_NODE_27728_length_242_cov_0.923077_g27572_i0 PRJNA1247234 27728 242 0.923077 2.23384634 Synergistaceae bacterium 2053624 Bacteria Bacteria 169 2.12e-51   NR MBQ7151052.1 2053624 g27572 i0 100 0.991735537190083 80 0 99.2 0 3 242 44 123 MBQ7151052.1 cytidylate kinase-like family protein [Synergistaceae bacterium] diamond 240 169 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
28936867 28936867 PRJNA1247234_P_NODE_25588_length_245_cov_0.906977_g25432_i0 PRJNA1247234 25588 245 0.906977 2.22209365 Synergistaceae bacterium 2053624 Bacteria Bacteria 163 7.4e-48   NR MBQ7152239.1 2053624 g25432 i0 100 0.991836734693878 81 0 99.2 0 2 244 25 105 MBQ7152239.1 AEC family transporter [Synergistaceae bacterium] diamond 243 163 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
29063212 29063212 PRJNA1247234_P_NODE_27848_length_242_cov_0.923077_g27692_i0 PRJNA1247234 27848 242 0.923077 2.23384634 Synergistaceae bacterium 2053624 Bacteria Bacteria 129 1.48e-33   NR MBQ8691997.1 2053624 g27692 i0 95.4 0.805785123966942 65 3 80.6 0 241 47 320 384 MBQ8691997.1 SAM-dependent DNA methyltransferase [Synergistaceae bacterium] diamond 195 129 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
29725850 29725850 PRJNA1247234_P_NODE_23810_length_248_cov_0.891429_g23654_i0 PRJNA1247234 23810 248 0.891429 2.21074392 Synergistaceae bacterium 2053624 Bacteria Bacteria 120 4.54e-31   NR MBQ9389144.1 2053624 g23654 i0 72.5 0.967741935483871 80 22 96.8 0 246 7 155 234 MBQ9389144.1 HindIII family type II restriction endonuclease [Synergistaceae bacterium] diamond 240 120 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
29978798 29978798 PRJNA1247234_P_NODE_7611_length_381_cov_1.012987_g7455_i0 PRJNA1247234 7611 381 1.012987 3.85948047 Synergistaceae bacterium 2053624 Bacteria Bacteria 243 3.62e-79   NR MBR0167890.1 2053624 g7455 i0 99.2 0.976377952755906 124 1 97.6 0 3 374 67 190 MBR0167890.1 ATP-binding cassette domain-containing protein [Synergistaceae bacterium] diamond 372 243 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
30484410 30484410 PRJNA1247234_P_NODE_21553_length_251_cov_0.876404_g21397_i0 PRJNA1247234 21553 251 0.876404 2.19977404 Synergistaceae bacterium 2053624 Bacteria Bacteria 167 3.08e-50   NR MBQ3645408.1 2053624 g21397 i0 91.5 4.9003984063745 82 7 98 0 6 251 1 82 MBQ3645408.1 carbon starvation protein A [Synergistaceae bacterium] diamond 1230 167 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
30800142 30800142 PRJNA1247234_P_NODE_24334_length_247_cov_0.896552_g24178_i0 PRJNA1247234 24334 247 0.896552 2.21448344 Synergistaceae bacterium 2053624 Bacteria Bacteria 62.4 4.73e-9   NR MBR0150505.1 2053624 g24178 i0 76.7 0.995951417004049 43 10 52.2 0 29 157 48 90 MBR0150505.1 PBP1A family penicillin-binding protein [Synergistaceae bacterium] diamond 246 62.4 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
30863401 30863401 PRJNA1247234_P_NODE_21514_length_251_cov_0.876404_g21358_i0 PRJNA1247234 21514 251 0.876404 2.19977404 Synergistales bacterium 2268201 Bacteria Bacteria 48.1 4.97e-4   NR MDY6402338.1 2268201 g21358 i0 92 0.298804780876494 25 2 29.9 0 17 91 383 407 MDY6402338.1 DNA polymerase IV [Synergistales bacterium] diamond 75 48.1 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales     Synergistales bacterium
30863402 30863402 PRJNA1247234_P_NODE_24574_length_247_cov_0.896552_g24418_i0 PRJNA1247234 24574 247 0.896552 2.21448344 Synergistaceae bacterium 2053624 Bacteria Bacteria 164 7.249999999999999e-48   NR MBQ7559838.1 2053624 g24418 i0 97.6 0.995951417004049 82 2 99.6 0 247 2 47 128 MBQ7559838.1 phosphatase PAP2 family protein [Synergistaceae bacterium] diamond 246 164 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
31242545 31242545 PRJNA1247234_P_NODE_20395_length_253_cov_0.866667_g20239_i0 PRJNA1247234 20395 253 0.866667 2.19266751 Synergistaceae bacterium 2053624 Bacteria Bacteria 162 2.57e-46   NR MBQ7152222.1 2053624 g20239 i0 98.8 0.99604743083004 84 1 99.6 0 252 1 227 310 MBQ7152222.1 efflux RND transporter periplasmic adaptor subunit [Synergistaceae bacterium] diamond 252 162 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
31527416 31527416 PRJNA1247234_P_NODE_5176_length_446_cov_1.195710_g5022_i0 PRJNA1247234 5176 446 1.19571 5.3328666 Synergistaceae bacterium 2053624 Bacteria Bacteria 193 5.1300000000000005e-58   NR MBQ3456916.1 2053624 g5022 i0 70.8 0.874439461883408 130 35 85.4 1 383 3 109 238 MBQ3456916.1 AAA family ATPase [Synergistaceae bacterium] diamond 390 193 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
31622112 31622112 PRJNA1247234_P_NODE_27896_length_242_cov_0.923077_g27740_i0 PRJNA1247234 27896 242 0.923077 2.23384634 Synergistaceae bacterium 2053624 Bacteria Bacteria 137 1.7000000000000001e-35   NR MBQ7151742.1 2053624 g27740 i0 97.2 0.892561983471074 72 2 89.3 0 25 240 185 256 MBQ7151742.1 hypothetical protein [Synergistaceae bacterium] diamond 216 137 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
31748602 31748602 PRJNA1247234_P_NODE_19577_length_256_cov_1.278689_g19421_i0 PRJNA1247234 19577 256 1.278689 3.27344384 Synergistaceae bacterium 2053624 Bacteria Bacteria 116 5.76e-28   NR MBQ7195914.1 2053624 g19421 i0 63.5 2.98828125 85 31 99.6 0 255 1 458 542 MBQ7195914.1 AAA family ATPase [Synergistaceae bacterium] diamond 765 116 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
31938381 31938381 PRJNA1247234_P_NODE_6937_length_396_cov_1.086687_g6781_i0 PRJNA1247234 6937 396 1.086687 4.30328052 Synergistaceae bacterium 2053624 Bacteria Bacteria 163 2.75e-46   NR MBQ9432731.1 2053624 g6781 i0 95.1 0.621212121212121 82 4 62.1 0 149 394 247 328 MBQ9432731.1 acyltransferase family protein [Synergistaceae bacterium] diamond 246 163 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
31970111 31970111 PRJNA1247234_P_NODE_11058_length_329_cov_0.914062_g10902_i0 PRJNA1247234 11058 329 0.914062 3.00726398 Synergistaceae bacterium 2053624 Bacteria Bacteria 152 9.779999999999999e-43   NR MBQ7562346.1 2053624 g10902 i0 98.7 0.702127659574468 77 1 70.2 0 99 329 1 77 MBQ7562346.1 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [Synergistaceae bacterium] diamond 231 152 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
32001809 32001809 PRJNA1247234_P_NODE_26238_length_244_cov_0.912281_g26082_i0 PRJNA1247234 26238 244 0.912281 2.22596564 Synergistaceae bacterium 2053624 Bacteria Bacteria 147 2.34e-40   NR MBR0248361.1 2053624 g26082 i0 93.8 3.92213114754098 80 5 98.4 0 242 3 180 259 MBR0248361.1 transposase [Synergistaceae bacterium] diamond 957 147 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
32191753 32191753 PRJNA1247234_P_NODE_17678_length_270_cov_1.208122_g17522_i0 PRJNA1247234 17678 270 1.208122 3.2619294 Synergistaceae bacterium 2053624 Bacteria Bacteria 151 7.12e-44   NR MBQ9433735.1 2053624 g17522 i0 98.7 0.866666666666667 78 1 86.7 0 270 37 153 230 MBQ9433735.1 hypothetical protein [Synergistaceae bacterium] diamond 234 151 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
32255302 32255302 PRJNA1247234_P_NODE_7518_length_383_cov_0.977419_g7362_i0 PRJNA1247234 7518 383 0.977419 3.74351477 Synergistaceae bacterium 2053624 Bacteria Bacteria 242 5.37e-78   NR MBQ7217342.1 2053624 g7362 i0 92.1 0.994778067885117 127 10 99.5 0 382 2 140 266 MBQ7217342.1 hypothetical protein [Synergistaceae bacterium] diamond 381 242 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
32286901 32286901 PRJNA1247234_P_NODE_20559_length_253_cov_0.866667_g20403_i0 PRJNA1247234 20559 253 0.866667 2.19266751 Synergistaceae bacterium 2053624 Bacteria Bacteria 162 1.7799999999999998e-47   NR MBQ9433521.1 2053624 g20403 i0 94 0.99604743083004 84 5 99.6 0 1 252 59 142 MBQ9433521.1 tRNA pseudouridine(55) synthase TruB [Synergistaceae bacterium] diamond 252 162 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
32697136 32697136 PRJNA1247234_P_NODE_9960_length_342_cov_1.684015_g9804_i0 PRJNA1247234 9960 342 1.684015 5.7593313 Synergistaceae bacterium 2053624 Bacteria Bacteria 135 4.87e-35   NR MBQ7560924.1 2053624 g9804 i0 93.2 0.640350877192982 73 5 64 0 2 220 425 497 MBQ7560924.1 ABC transporter ATP-binding protein [Synergistaceae bacterium] diamond 219 135 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
32728794 32728794 PRJNA1247234_P_NODE_17320_length_273_cov_0.870000_g17164_i0 PRJNA1247234 17320 273 0.87 2.3751 Synergistaceae bacterium 2053624 Bacteria Bacteria 103 1.26e-26   NR MBQ3345851.1 2053624 g17164 i0 86 1.86813186813187 57 8 62.6 0 273 103 47 103 MBQ3345851.1 hypothetical protein [Synergistaceae bacterium] diamond 510 103 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;