contig_metadata
5 rows where bioproject = "PRJNA1247234" and tax_phylum = "Pisuviricota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13105209 | 13105209 | PRJNA1247234_P_NODE_16131_length_281_cov_1.500000_g15975_i0 | PRJNA1247234 | 16131 | 281 | 1.5 | 4.215 | Potyvirus orionspassiflorae | 3240573 | Viruses | Viruses | 503 | 5.95e-138 | NTclustered | gi|998454002|gb|KT724930.1| | 341167 | g15975 | i0 | 98.932 | 6.13523131672598 | 281 | 3 | 100 | 0 | 1 | 281 | 6855 | 6575 | East Asian Passiflora virus isolate EAPV-IB-dpd, complete genome | blastn | 1724 | 503 | 1 | Viruses | Orthornavirae | Pisuviricota | Stelpaviricetes | Patatavirales | Potyviridae | Potyvirus | Potyvirus orionspassiflorae | ||
| 16928883 | 16928883 | PRJNA1247234_P_NODE_874_length_945_cov_2.305046_g777_i0 | PRJNA1247234 | 874 | 945 | 2.305046 | 21.7826847 | Danio blood picornavirus/Zebrafish picornavirus 2 | 3063761 | Viruses | Viruses | 1301 | 0 | NTclustered | gi|2551699335|gb|OK619588.1| | 3063761 | g777 | i0 | 91.429 | 1 | 945 | 81 | 100 | 0 | 1 | 945 | 6083 | 7027 | Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds | blastn | 945 | 1301 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Danio blood picornavirus/Zebrafish picornavirus 2 | |||
| 19477514 | 19477514 | PRJNA1247234_P_NODE_21016_length_252_cov_0.871508_g20860_i0 | PRJNA1247234 | 21016 | 252 | 0.871508 | 2.19620016 | Potyvirus orionspassiflorae | 3240573 | Viruses | Viruses | 433 | 6.98e-117 | NTclustered | gi|998454002|gb|KT724930.1| | 341167 | g20860 | i0 | 97.992 | 3.95238095238095 | 249 | 5 | 99 | 0 | 4 | 252 | 6293 | 6045 | East Asian Passiflora virus isolate EAPV-IB-dpd, complete genome | blastn | 996 | 433 | 1 | Viruses | Orthornavirae | Pisuviricota | Stelpaviricetes | Patatavirales | Potyviridae | Potyvirus | Potyvirus orionspassiflorae | ||
| 19477695 | 19477695 | PRJNA1247234_P_NODE_6096_length_416_cov_3.361516_g5942_i0 | PRJNA1247234 | 6096 | 416 | 3.361516 | 13.98390656 | Danio blood picornavirus/Zebrafish picornavirus 2 | 3063761 | Viruses | Viruses | 558 | 1.93e-154 | NTclustered | gi|2551699335|gb|OK619588.1| | 3063761 | g5942 | i0 | 90.887 | 1.00240384615385 | 417 | 36 | 100 | 2 | 1 | 416 | 5596 | 6011 | Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds | blastn | 417 | 558 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Danio blood picornavirus/Zebrafish picornavirus 2 | |||
| 29144639 | 29144639 | PRJNA1247234_P_NODE_14609_length_293_cov_1.677273_g14453_i0 | PRJNA1247234 | 14609 | 293 | 1.677273 | 4.91440989 | Viruses | 10239 | Viruses | Viruses | 67 | 2.07e-10 | NR | AVM87439.1 | 2116200 | g14453 | i0 | 54.2 | 2.31399317406143 | 59 | 27 | 60.4 | 0 | 116 | 292 | 928 | 986 | AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] | diamond | 678 | 67 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Wuhan sharpbelly picornavirus 1 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;