RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA1247234", tax_phylum = "Lenarviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 6 ✖

tax_phylum 1

  • Lenarviricota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1247234 · 6 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1626013 1626013 PRJNA1247234_P_NODE_14862_length_291_cov_1.431193_g14706_i0 PRJNA1247234 14862 291 1.431193 4.16477163 Erysiphe necator associated mitovirus 35 2950447 Viruses Viruses 494 3.7299999999999996e-135   NTclustered gi|2250491993|gb|ON605605.1| 2950447 g14706 i0 97.251 9.43642611683849 291 8 100 0 1 291 1948 2238 Erysiphe necator associated mitovirus 35 RNA-dependent RNA polymerase gene, complete cds blastn 2746 494 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Erysiphe necator associated mitovirus 35
16928720 16928720 PRJNA1247234_P_NODE_24794_length_246_cov_0.901734_g24638_i0 PRJNA1247234 24794 246 0.901734 2.21826564 Sclerotinia sclerotiorum mitovirus 3-WX 2822885 Viruses Viruses 425 1.14e-114   NTclustered gi|2029278333|gb|MT646425.1| 2822885 g24638 i0 97.959 9.89024390243902 245 5 99 0 1 245 1601 1845 MAG: Sclerotinia sclerotiorum mitovirus 3-WX, partial genome blastn 2433 425 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Sclerotinia sclerotiorum mitovirus 3-WX
20752938 20752938 PRJNA1247234_P_NODE_21557_length_251_cov_0.876404_g21401_i0 PRJNA1247234 21557 251 0.876404 2.19977404 Sclerotinia sclerotiorum mitovirus 3-WX 2822885 Viruses Viruses 440 4.149999999999998e-119   NTclustered gi|2029278333|gb|MT646425.1| 2822885 g21401 i0 98.4 8.93227091633466 250 4 99 0 2 251 1512 1263 MAG: Sclerotinia sclerotiorum mitovirus 3-WX, partial genome blastn 2242 440 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Sclerotinia sclerotiorum mitovirus 3-WX
20753164 20753164 PRJNA1247234_P_NODE_7497_length_383_cov_1.458065_g7341_i0 PRJNA1247234 7497 383 1.458065 5.58438895 Duamitovirus boci1 2955769 Viruses Viruses 656 0   NTclustered gi|955660101|emb|LN827944.1| 444193 g7341 i0 97.65 6.25065274151436 383 8 100 1 1 383 398 17 Botrytis cinerea mitovirus 1 RdRp gene for RNA dependent RNA polymerase, isolate HAZ3-1 blastn 2394 656 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Duamitovirus Duamitovirus boci1
22028055 22028055 PRJNA1247234_P_NODE_15358_length_287_cov_2.028037_g15202_i0 PRJNA1247234 15358 287 2.028037 5.82046619 Sclerotinia sclerotiorum mitovirus 3-WX 2822885 Viruses Viruses 497 2.84e-136   NTclustered gi|2029278333|gb|MT646425.1| 2822885 g15202 i0 97.909 13.191637630662 287 6 100 0 1 287 1296 1010 MAG: Sclerotinia sclerotiorum mitovirus 3-WX, partial genome blastn 3786 497 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Sclerotinia sclerotiorum mitovirus 3-WX
22028081 22028081 PRJNA1247234_P_NODE_16558_length_278_cov_1.502439_g16402_i0 PRJNA1247234 16558 278 1.502439 4.17678042 Duamitovirus scsc3 2955836 Viruses Viruses 448 2.79e-121   NTclustered gi|1838367559|gb|MN954876.1| 1279099 g16402 i0 95.683 1 278 12 100 0 1 278 2960 2683 Sclerotinia sclerotiorum mitovirus 3 isolate BCI2_DN28, complete genome blastn 278 448 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Duamitovirus Duamitovirus scsc3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;