RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1247234", tax_clade = "Opisthokonta" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA1247234 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31527411 31527411 PRJNA1247234_P_NODE_21556_length_251_cov_0.876404_g21400_i0 PRJNA1247234 21556 251 0.876404 2.19977404 Pseudoloma neurophilia 146866 Fungi Fungi 95.5 1.03e-20   NR KRH95049.1 146866 g21400 i0 62.7 0.99203187250996006 83 31 99.2 0 250 2 265 347 KRH95049.1 hypothetical protein M153_3400019056 [Pseudoloma neurophilia] diamond 249 95.5 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
31924923 31924923 PRJNA1247234_P_NODE_26517_length_244_cov_0.912281_g26361_i0 PRJNA1247234 26517 244 0.912281 2.22596564 Fungi 4751 Fungi Fungi 104 9.09e-25   NR KAK6090677.1 40135 g26361 i0 69.7 18.7254098360656 76 23 93.4 0 228 1 24 99 KAK6090677.1 hypothetical protein P3W45_000400 [Vairimorpha bombi] diamond 4569 104 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vairimorpha Vairimorpha bombi
32508304 32508304 PRJNA1247234_P_NODE_24559_length_247_cov_0.896552_g24403_i0 PRJNA1247234 24559 247 0.896552 2.21448344 Pseudoloma neurophilia 146866 Fungi Fungi 118 6.2e-33   NR KRH94563.1 146866 g24403 i0 100 0.692307692307692 57 0 69.2 0 2 172 5 61 KRH94563.1 hypothetical protein M153_2090003, partial [Pseudoloma neurophilia] diamond 171 118 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;