RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA1247234", tax_clade = "FCB group" and tax_phylum = "Candidatus Kapaibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA1247234 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27768794 27768794 PRJNA1247234_P_NODE_22904_length_249_cov_0.886364_g22748_i0 PRJNA1247234 22904 249 0.886364 2.20704636 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 131 3.01e-33   NR MFA7326857.1 2447898 g22748 i0 89.2 1 83 8 100 1 1 249 319 400 MFA7326857.1 hypothetical protein [Candidatus Kapaibacterium sp.] diamond 249 131 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
28021303 28021303 PRJNA1247234_P_NODE_21065_length_252_cov_0.871508_g20909_i0 PRJNA1247234 21065 252 0.871508 2.19620016 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 84 6.62e-17   NR MEZ4723610.1 2447898 g20909 i0 56.1 0.785714285714286 66 27 76.2 1 41 232 198 263 MEZ4723610.1 hypothetical protein [Candidatus Kapaibacterium sp.] diamond 198 84 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
29252301 29252301 PRJNA1247234_P_NODE_27309_length_243_cov_0.917647_g27153_i0 PRJNA1247234 27309 243 0.917647 2.22988221 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 167 5.77e-46   NR MFA7327850.1 2447898 g27153 i0 97.5 0.987654320987654 80 2 98.8 0 2 241 1351 1430 MFA7327850.1 T9SS type A sorting domain-containing protein [Candidatus Kapaibacterium sp.] diamond 240 167 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
32665669 32665669 PRJNA1247234_P_NODE_20420_length_253_cov_0.866667_g20264_i0 PRJNA1247234 20420 253 0.866667 2.19266751 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 100 2.8200000000000003e-22   NR MDT3738244.1 2447898 g20264 i0 57.1 2.96442687747036 84 36 99.6 0 2 253 544 627 MDT3738244.1 efflux RND transporter permease subunit [Candidatus Kapaibacterium sp.] diamond 750 100 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;