RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1247234", tax_clade = "FCB group" and tax_phylum = "Candidatus Cloacimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA1247234 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10555508 10555508 PRJNA1247234_P_NODE_20249_length_253_cov_0.866667_g20093_i0 PRJNA1247234 20249 253 0.866667 2.19266751 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 157 2.8399999999999998e-42   NR NLG62176.1 2030808 g20093 i0 88 0.984189723320158 83 10 98.4 0 251 3 293 375 NLG62176.1 isoleucine--tRNA ligase [Candidatus Cloacimonadota bacterium] diamond 249 157 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
32445028 32445028 PRJNA1247234_P_NODE_22119_length_250_cov_0.881356_g21963_i0 PRJNA1247234 22119 250 0.881356 2.20339 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 114 7.82e-29   NR NLG62231.1 2030808 g21963 i0 70 0.96 80 24 96 0 245 6 110 189 NLG62231.1 hypothetical protein [Candidatus Cloacimonadota bacterium] diamond 240 114 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;