contig_metadata
21 rows where bioproject = "PRJNA1245487", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1051591 | 1051591 | PRJNA1245487_P_NODE_981_length_1129_cov_9.564394_g49_i1 | PRJNA1245487 | 981 | 1129 | 9.564394 | 107.98200826 | Stigmatella | 40 | Bacteria | Bacteria | 1766 | 0 | NTclustered | gi|2244675|emb|X87291.1| | 41 | g49 | i1 | 94.956 | 235.219663418955 | 1130 | 52 | 100 | 5 | 1 | 1129 | 649 | 1774 | S.aurantiaca 23S rRNA gene | blastn | 265563 | 1766 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Stigmatella | Stigmatella aurantiaca | ||
| 1625860 | 1625860 | PRJNA1245487_P_NODE_23182_length_219_cov_5.376712_g22844_i0 | PRJNA1245487 | 23182 | 219 | 5.376712 | 11.77499928 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 311 | 2.9000000000000004e-80 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g22844 | i0 | 92.273 | 273.045662100457 | 220 | 15 | 100 | 2 | 1 | 219 | 3942096 | 3942314 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 59797 | 311 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 7429122 | 7429122 | PRJNA1245487_P_NODE_13526_length_312_cov_1.828452_g13188_i0 | PRJNA1245487 | 13526 | 312 | 1.828452 | 5.70477024 | Myxococcales | 29 | Bacteria | Bacteria | 239 | 2.09e-58 | NTclustered | gi|913607065|gb|CP012332.1| | 1391653 | g13188 | i0 | 83.333 | 466.157051282051 | 270 | 34 | 85 | 11 | 46 | 310 | 178801 | 178538 | Vulgatibacter incomptus strain DSM 27710, complete genome | blastn | 145441 | 239 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Vulgatibacteraceae | Vulgatibacter | Vulgatibacter incomptus | ||
| 7429209 | 7429209 | PRJNA1245487_P_NODE_18246_length_260_cov_1.475936_g17908_i0 | PRJNA1245487 | 18246 | 260 | 1.475936 | 3.8374335999999998 | Stigmatella | 40 | Bacteria | Bacteria | 414 | 2.62e-111 | NTclustered | gi|2244675|emb|X87291.1| | 41 | g17908 | i0 | 95.385 | 262.134615384615 | 260 | 12 | 100 | 0 | 1 | 260 | 752 | 493 | S.aurantiaca 23S rRNA gene | blastn | 68155 | 414 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Stigmatella | Stigmatella aurantiaca | ||
| 8704419 | 8704419 | PRJNA1245487_P_NODE_9787_length_382_cov_7.511327_g9449_i0 | PRJNA1245487 | 9787 | 382 | 7.511327 | 28.69326914 | Haliangium | 162027 | Bacteria | Bacteria | 490 | 6.509999999999998e-134 | NTclustered | gi|470485361|ref|NR_076697.1| | 80816 | g9449 | i0 | 90 | 157.722513089005 | 380 | 37 | 99 | 1 | 1 | 380 | 1227 | 849 | Haliangium ochraceum strain SMP-2 23S ribosomal RNA gene, complete sequence | blastn | 60250 | 490 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Haliangium | Haliangium ochraceum | |||
| 10555191 | 10555191 | PRJNA1245487_P_NODE_18169_length_260_cov_4.224599_g17831_i0 | PRJNA1245487 | 18169 | 260 | 4.224599 | 10.9839574 | Pendulispora brunnea | 2905690 | Bacteria | Bacteria | 387 | 5.72e-103 | NTclustered | gi|2698055994|gb|CP089982.1| | 2905690 | g17831 | i0 | 93.487 | 230.488461538462 | 261 | 15 | 100 | 2 | 1 | 260 | 7408929 | 7409188 | Pendulispora brunnea strain MSr12523 chromosome, complete genome | blastn | 59927 | 387 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora brunnea | ||
| 11254559 | 11254559 | PRJNA1245487_P_NODE_14169_length_303_cov_1.356522_g13831_i0 | PRJNA1245487 | 14169 | 303 | 1.356522 | 4.11026166 | Sorangium | 39643 | Bacteria | Bacteria | 462 | 1.1e-125 | NTclustered | gi|507148211|ref|NR_103018.1| | 56 | g13831 | i0 | 94.352 | 135.920792079208 | 301 | 17 | 99 | 0 | 3 | 303 | 1253 | 953 | Sorangium cellulosum strain So ce 56 23S ribosomal RNA gene, complete sequence | blastn | 41184 | 462 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 13804868 | 13804868 | PRJNA1245487_P_NODE_4071_length_622_cov_3.424408_g3743_i0 | PRJNA1245487 | 4071 | 622 | 3.424408 | 21.29981776 | Pendulispora | 3375062 | Bacteria | Bacteria | 981 | 0 | NTclustered | gi|2698045512|gb|CP089929.1| | 2741070 | g3743 | i0 | 95.338 | 152.390675241158 | 622 | 22 | 100 | 4 | 1 | 622 | 7288860 | 7289474 | Pendulispora rubella strain MSr11368 chromosome, complete genome | blastn | 94787 | 985 | 0.995939086294416 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora rubella | ||
| 14380157 | 14380157 | PRJNA1245487_P_NODE_11392_length_348_cov_2.829091_g11054_i0 | PRJNA1245487 | 11392 | 348 | 2.829091 | 9.84523668 | Anaeromyxobacter oryzae | 2918170 | Bacteria | Bacteria | 566 | 9.519999999999999e-157 | NTclustered | gi|2199265233|dbj|AP025591.1| | 2918170 | g11054 | i0 | 95.977 | 603.040229885057 | 348 | 14 | 100 | 0 | 1 | 348 | 947226 | 947573 | Anaeromyxobacter oryzae DNA, complete genome | blastn | 209858 | 566 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter oryzae | ||
| 15654058 | 15654058 | PRJNA1245487_P_NODE_14613_length_296_cov_3.062780_g14275_i0 | PRJNA1245487 | 14613 | 296 | 3.06278 | 9.0658288 | Archangium violaceum | 83451 | Bacteria | Bacteria | 398 | 3.059999999999999e-106 | NTclustered | gi|2579675135|gb|CP043493.1| | 83451 | g14275 | i0 | 90.97 | 215.084459459459 | 299 | 21 | 100 | 6 | 1 | 296 | 5180143 | 5179848 | Archangium violaceum strain Cbvi 34 chromosome, complete genome | blastn | 63665 | 398 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium violaceum | ||
| 16353986 | 16353986 | PRJNA1245487_P_NODE_6733_length_477_cov_6.131188_g6397_i0 | PRJNA1245487 | 6733 | 477 | 6.131188 | 29.24576676 | Stigmatella | 40 | Bacteria | Bacteria | 658 | 0 | NTclustered | gi|507148216|ref|NR_103023.1| | 41 | g6397 | i0 | 91.684 | 245.496855345912 | 481 | 30 | 100 | 8 | 1 | 477 | 51 | 525 | Stigmatella aurantiaca strain DW4/3-1 23S ribosomal RNA gene, complete sequence | blastn | 117102 | 658 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Stigmatella | Stigmatella aurantiaca | ||
| 18202781 | 18202781 | PRJNA1245487_P_NODE_16295_length_278_cov_1.102439_g15957_i0 | PRJNA1245487 | 16295 | 278 | 1.102439 | 3.06478042 | Archangium gephyra | 48 | Bacteria | Bacteria | 211 | 3.9900000000000002e-50 | NTclustered | gi|2809295724|gb|CP102578.1| | 48 | g15957 | i0 | 81.298 | 59.7841726618705 | 262 | 47 | 94 | 2 | 12 | 272 | 10059562 | 10059822 | Archangium gephyra strain SDU49 chromosome, complete genome | blastn | 16620 | 211 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium gephyra | ||
| 18202831 | 18202831 | PRJNA1245487_P_NODE_20255_length_248_cov_2.622857_g19917_i0 | PRJNA1245487 | 20255 | 248 | 2.622857 | 6.50468536 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 241 | 4.46e-59 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g19917 | i0 | 85.185 | 16.258064516129 | 243 | 27 | 96 | 7 | 10 | 247 | 7915580 | 7915818 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 4032 | 241 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 20752519 | 20752519 | PRJNA1245487_P_NODE_11177_length_352_cov_3.559140_g10839_i0 | PRJNA1245487 | 11177 | 352 | 3.55914 | 12.5281728 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 444 | 4.699999999999998e-120 | NTclustered | gi|2258824976|gb|CP060221.1| | 2026763 | g10839 | i0 | 89.518 | 95.8835227272727 | 353 | 34 | 100 | 3 | 1 | 352 | 1312389 | 1312739 | MAG: Myxococcales bacterium isolate HK-STAS-MYXO-35 chromosome, complete genome | blastn | 33751 | 444 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 20752539 | 20752539 | PRJNA1245487_P_NODE_12917_length_322_cov_1.232932_g12579_i0 | PRJNA1245487 | 12917 | 322 | 1.232932 | 3.97004104 | Pendulispora albinea | 2741071 | Bacteria | Bacteria | 497 | 3.2299999999999998e-136 | NTclustered | gi|2698035964|gb|CP089984.1| | 2741071 | g12579 | i0 | 94.444 | 122.189440993789 | 324 | 16 | 100 | 2 | 1 | 322 | 3589223 | 3588900 | Pendulispora albinea strain MSr11954 chromosome, complete genome | blastn | 39345 | 497 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora albinea | ||
| 24003261 | 24003261 | PRJNA1245487_P_NODE_12479_length_329_cov_2.027344_g12141_i0 | PRJNA1245487 | 12479 | 329 | 2.027344 | 6.66996176 | root | 1 | Root_unresolved | Root_unresolved | 401 | 2.6699999999999992e-107 | NTclustered | gi|169977285|emb|AM946600.1| | 52 | g12141 | i0 | 88.788 | 118.693009118541 | 330 | 34 | 99 | 3 | 1 | 328 | 1621 | 1949 | Chondromyces crocatus ajudazol biosynthesis gene cluster, strain Cmc5 | blastn | 39050 | 401 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Chondromyces | Chondromyces crocatus | |||
| 24003422 | 24003422 | PRJNA1245487_P_NODE_22159_length_241_cov_2.779762_g21821_i0 | PRJNA1245487 | 22159 | 241 | 2.779762 | 6.69922642 | Stigmatella | 40 | Bacteria | Bacteria | 340 | 4.13e-89 | NTclustered | gi|507148216|ref|NR_103023.1| | 41 | g21821 | i0 | 92.116 | 282.319502074689 | 241 | 19 | 100 | 0 | 1 | 241 | 27 | 267 | Stigmatella aurantiaca strain DW4/3-1 23S ribosomal RNA gene, complete sequence | blastn | 68039 | 340 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Stigmatella | Stigmatella aurantiaca | ||
| 24577528 | 24577528 | PRJNA1245487_P_NODE_9020_length_403_cov_2.300000_g8682_i0 | PRJNA1245487 | 9020 | 403 | 2.3 | 9.269 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 444 | 5.46e-120 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g8682 | i0 | 87 | 206.411910669975 | 400 | 45 | 98 | 7 | 8 | 403 | 3941856 | 3942252 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 83184 | 444 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 26630437 | 26630437 | PRJNA1245487_P_NODE_11141_length_353_cov_1.950000_g10803_i0 | PRJNA1245487 | 11141 | 353 | 1.95 | 6.8835 | Myxococcaceae bacterium | 2484252 | Bacteria | Bacteria | 89.4 | 6.25e-18 | NR | MER2566866.1 | 2484252 | g10803 | i0 | 43.6 | 0.994334277620397 | 117 | 53 | 96.9 | 3 | 3 | 344 | 808 | 914 | MER2566866.1 thrombospondin type-1 domain-containing protein [Myxococcaceae bacterium] | diamond | 351 | 89.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcaceae bacterium | |||
| 27800283 | 27800283 | PRJNA1245487_P_NODE_21204_length_245_cov_0.906977_g20866_i0 | PRJNA1245487 | 21204 | 245 | 0.906977 | 2.22209365 | Kofleriaceae bacterium | 2212474 | Bacteria | Bacteria | 42.7 | 0.0351 | NR | HUQ03225.1 | 2212474 | g20866 | i0 | 34.8 | 0.808163265306122 | 66 | 39 | 75.9 | 2 | 217 | 32 | 159 | 224 | HUQ03225.1 class II aldolase/adducin family protein [Kofleriaceae bacterium] | diamond | 198 | 42.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Kofleriaceae bacterium | ||||
| 28526507 | 28526507 | PRJNA1245487_P_NODE_16187_length_279_cov_1.504854_g15849_i0 | PRJNA1245487 | 16187 | 279 | 1.504854 | 4.19854266 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 82.4 | 6.59e-16 | NR | MBI5542280.1 | 2026735 | g15849 | i0 | 60.8 | 0.849462365591398 | 79 | 28 | 81.7 | 1 | 49 | 276 | 13 | 91 | MBI5542280.1 TonB-dependent receptor [Deltaproteobacteria bacterium] | diamond | 237 | 82.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;