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contig_metadata

9 rows where bioproject = "PRJNA1245487", tax_kingdom = "Pseudomonadati" and tax_phylum = "Abditibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Abditibacteriota · 9 ✖

tax_kingdom 1

  • Pseudomonadati · 9 ✖

bioproject 1

  • PRJNA1245487 · 9 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
350941 350941 PRJNA1245487_P_NODE_17621_length_265_cov_2.958333_g17283_i0 PRJNA1245487 17621 265 2.958333 7.83958245 Abditibacteriota bacterium 2783868 Bacteria Bacteria 322 1.67e-83   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g17283 i0 88.679 270.743396226415 265 28 99 2 1 264 2851890 2851627 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 71747 322 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
9279238 9279238 PRJNA1245487_P_NODE_10888_length_358_cov_1.912281_g10550_i0 PRJNA1245487 10888 358 1.912281 6.84596598 Abditibacteriota bacterium 2783868 Bacteria Bacteria 289 2.37e-73   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g10550 i0 85.121 537.924581005587 289 35 78 7 78 358 2852152 2851864 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 192577 289 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
9279252 9279252 PRJNA1245487_P_NODE_12508_length_328_cov_3.513725_g12170_i0 PRJNA1245487 12508 328 3.513725 11.525018 Abditibacteriota bacterium 2783868 Bacteria Bacteria 281 3.61e-71   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g12170 i0 85.662 632.280487804878 272 34 83 5 58 328 2850970 2850703 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 207388 281 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
11829686 11829686 PRJNA1245487_P_NODE_16070_length_280_cov_2.623188_g15732_i0 PRJNA1245487 16070 280 2.623188 7.3449264 Abditibacteriota bacterium 2783868 Bacteria Bacteria 335 2.2899999999999993e-87   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g15732 i0 88.214 683.778571428571 280 33 100 0 1 280 2851897 2852176 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 191458 335 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
14380345 14380345 PRJNA1245487_P_NODE_7992_length_434_cov_2.005540_g7655_i0 PRJNA1245487 7992 434 2.00554 8.7040436 Abditibacteriota bacterium 2783868 Bacteria Bacteria 540 7.34e-149   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g7655 i0 89.22 257.258064516129 436 42 100 5 1 434 2853206 2852774 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 111650 540 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
14380359 14380359 PRJNA1245487_P_NODE_9152_length_399_cov_5.447853_g8814_i0 PRJNA1245487 9152 399 5.447853 21.73693347 Abditibacteriota bacterium 2783868 Bacteria Bacteria 532 1.12e-146   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g8814 i0 90.727 237.438596491228 399 37 100 0 1 399 2851772 2851374 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 94738 532 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
18202837 18202837 PRJNA1245487_P_NODE_20615_length_247_cov_1.333333_g20277_i0 PRJNA1245487 20615 247 1.333333 3.29333251 Abditibacteriota bacterium 2783868 Bacteria Bacteria 300 7.22e-77   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g20277 i0 89.024 453.408906882591 246 21 99 5 4 247 2851564 2851323 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 111992 300 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
23303394 23303394 PRJNA1245487_P_NODE_10719_length_361_cov_3.940972_g10381_i0 PRJNA1245487 10719 361 3.940972 14.22690892 Abditibacteriota bacterium 2783868 Bacteria Bacteria 315 3.95e-81   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g10381 i0 88.015 493.880886426593 267 31 74 1 1 267 2850704 2850969 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 178291 315 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
24577435 24577435 PRJNA1245487_P_NODE_21360_length_244_cov_1.479532_g21022_i0 PRJNA1245487 21360 244 1.479532 3.61005808 Abditibacteriota bacterium 2783868 Bacteria Bacteria 335 1.9499999999999992e-87   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g21022 i0 91.393 242.872950819672 244 21 100 0 1 244 2852800 2853043 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 59261 335 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;