RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1245487", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1245487 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9279303 9279303 PRJNA1245487_P_NODE_16768_length_273_cov_2.040000_g16430_i0 PRJNA1245487 16768 273 2.04 5.5692 Metazoa 33208 Porifera other_Eukaryota 128 1.75e-35   NR XP_062513968.1 121492 g16430 i0 72.2 4.98901098901099 90 25 98.9 0 270 1 46 135 XP_062513968.1 large ribosomal subunit protein eL21-like [Corticium candelabrum] diamond 1362 129 0.992248062015504 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Plakinidae Corticium Corticium candelabrum
29063208 29063208 PRJNA1245487_P_NODE_19068_length_253_cov_0.866667_g18730_i0 PRJNA1245487 19068 253 0.866667 2.19266751 Amphimedon queenslandica 400682 Porifera other_Eukaryota 115 2.14e-29   NR XP_003385270.3 400682 g18730 i0 57.3 1.94466403162055 82 35 97.2 0 248 3 148 229 XP_003385270.3 PREDICTED: methylsterol monooxygenase 1-like [Amphimedon queenslandica] diamond 492 115 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Haplosclerida Niphatidae Amphimedon Amphimedon queenslandica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;