contig_metadata
5 rows where bioproject = "PRJNA1245487", tax_clade = "Sar" and tax_phylum = "Oomycota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11829701 | 11829701 | PRJNA1245487_P_NODE_17330_length_268_cov_1.297436_g16992_i0 | PRJNA1245487 | 17330 | 268 | 1.297436 | 3.47712848 | Pythium monospermum | 92964 | SAR_Eukaryotes | SAR_Eukaryotes | 490 | 4.39e-134 | NTclustered | gi|33520250|gb|AY273995.1| | 92964 | g16992 | i0 | 99.627 | 99.9925373134328 | 268 | 1 | 100 | 0 | 1 | 268 | 202 | 469 | Pythium monospermum large subunit ribosomal RNA gene, partial sequence | blastn | 26798 | 490 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Pythium | Pythium monospermum | ||
| 11829768 | 11829768 | PRJNA1245487_P_NODE_21990_length_242_cov_0.923077_g21652_i0 | PRJNA1245487 | 21990 | 242 | 0.923077 | 2.23384634 | Aphanomyces astaci | 112090 | SAR_Eukaryotes | SAR_Eukaryotes | 83.2 | 2.06e-16 | NR | XP_009821280.1 | 112090 | g21652 | i0 | 82.6 | 0.570247933884298 | 46 | 8 | 57 | 0 | 138 | 1 | 422 | 467 | XP_009821280.1 hypothetical protein H257_00345 [Aphanomyces astaci] | diamond | 138 | 83.2 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 25277375 | 25277375 | PRJNA1245487_P_NODE_13060_length_319_cov_2.219512_g12722_i0 | PRJNA1245487 | 13060 | 319 | 2.219512 | 7.08024328 | Phytophthora | 4783 | SAR_Eukaryotes | SAR_Eukaryotes | 182 | 3.66e-41 | NTclustered | gi|333104967|gb|HQ388923.1| | 4784 | g12722 | i0 | 77.888 | 64.987460815047 | 303 | 59 | 94 | 6 | 16 | 314 | 365 | 67 | Phytophthora capsici haplotype 7 translation elongation factor 1-alpha (EF1A) gene, partial cds | blastn | 20731 | 182 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora capsici | ||
| 31355773 | 31355773 | PRJNA1245487_P_NODE_18916_length_254_cov_1.486188_g18578_i0 | PRJNA1245487 | 18916 | 254 | 1.486188 | 3.77491752 | Peronosporomycetes | 3418804 | SAR_Eukaryotes | SAR_Eukaryotes | 108 | 2.22e-25 | NR | TYZ63927.1 | 1485010 | g18578 | i0 | 66.3 | 1.96062992125984 | 83 | 27 | 98 | 1 | 3 | 251 | 1114 | 1195 | TYZ63927.1 hypothetical protein PybrP1_009500 [[Pythium] brassicae (nom. inval.)] | diamond | 498 | 108 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Globisporangium | [Pythium] brassicae (nom. inval.) | ||
| 32462989 | 32462989 | PRJNA1245487_P_NODE_21319_length_244_cov_2.023392_g20981_i0 | PRJNA1245487 | 21319 | 244 | 2.023392 | 4.93707648 | root | 1 | Root_unresolved | Root_unresolved | 137 | 1.94e-38 | NR | KUF96518.1 | 4792 | g20981 | i0 | 77.5 | 44.2131147540984 | 80 | 18 | 98.4 | 0 | 3 | 242 | 109 | 188 | KUF96518.1 Thioredoxin [Phytophthora nicotianae] | diamond | 10788 | 138 | 0.992753623188406 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora nicotianae |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;