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contig_metadata

20 rows where bioproject = "PRJNA1245487", tax_clade = "Sar" and tax_phylum = "Ciliophora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 20 ✖

tax_clade 1

  • Sar · 20 ✖

bioproject 1

  • PRJNA1245487 · 20 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
351008 351008 PRJNA1245487_P_NODE_22761_length_231_cov_3.525316_g22423_i0 PRJNA1245487 22761 231 3.525316 8.14347996 Etoschophrya inornata 1170431 SAR_Eukaryotes SAR_Eukaryotes 412 8.22e-111   NTclustered gi|383508494|gb|JQ356867.1| 1170431 g22423 i0 98.712 101.090909090909 233 1 100 2 1 231 145 377 Etoschophrya inornata 18S ribosomal RNA gene, partial sequence; macronuclear blastn 23352 412 1 Eukaryota Sar   Ciliophora Colpodea Cyrtolophosidida Woodruffiidae Etoschophrya Etoschophrya inornata
2326628 2326628 PRJNA1245487_P_NODE_14462_length_298_cov_3.733333_g14124_i0 PRJNA1245487 14462 298 3.733333 11.12533234 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 551 2.239999999999999e-152   NTclustered gi|2065561668|gb|MZ540265.1| 44029 g14124 i0 100 98.8355704697987 298 0 100 0 1 298 843 546 Paramecium jenningsi isolate UR02 small subunit ribosomal RNA gene, partial sequence blastn 29453 551 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium jenningsi
3602025 3602025 PRJNA1245487_P_NODE_4583_length_587_cov_1.463035_g4252_i0 PRJNA1245487 4583 587 1.463035 8.58801545 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 270 2.24e-86   NR CAG9318302.1 1481888 g4252 i0 72.5 13.0630323679727 182 48 93 1 40 585 1 180 CAG9318302.1 unnamed protein product [Blepharisma stoltei] diamond 7668 270 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei
5454491 5454491 PRJNA1245487_P_NODE_12285_length_332_cov_1.343629_g11947_i0 PRJNA1245487 12285 332 1.343629 4.4608482800000004 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 197 1.1000000000000004e-59   NR CAG9318302.1 1481888 g11947 i0 81.8 1.98795180722892 110 20 99.4 0 330 1 1 110 CAG9318302.1 unnamed protein product [Blepharisma stoltei] diamond 660 197 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei
6153983 6153983 PRJNA1245487_P_NODE_15125_length_290_cov_6.244240_g14787_i0 PRJNA1245487 15125 290 6.24424 18.108296 Colpoda 5979 SAR_Eukaryotes SAR_Eukaryotes 514 2.85e-141   NTclustered gi|1802599796|gb|MT001205.1| 41631 g14787 i0 98.955 99.3965517241379 287 3 99 0 1 287 49 335 Colpoda sp. strain HFCC864 small subunit ribosomal RNA gene, partial sequence blastn 28825 514 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
6154100 6154100 PRJNA1245487_P_NODE_22145_length_241_cov_3.416667_g21807_i0 PRJNA1245487 22145 241 3.416667 8.23416747 root 1 Root_unresolved Root_unresolved 424 3.99e-114   NTclustered gi|345541658|gb|JN547815.1| 5911 g21807 i0 98.34 8.38589211618257 241 4 100 0 1 241 3439 3679 Tetrahymena thermophila strain ATCC 30382 18S ribosomal RNA gene, partial sequence; and internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 26S ribosomal RNA gene, complete sequence blastn 2021 424 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
6728972 6728972 PRJNA1245487_P_NODE_22506_length_235_cov_3.333333_g22168_i0 PRJNA1245487 22506 235 3.333333 7.83333255 Colpoda sp. 41631 SAR_Eukaryotes SAR_Eukaryotes 429 8.33e-116   NTclustered gi|2651357791|gb|PP174306.1| 41631 g22168 i0 99.574 90.5659574468085 235 1 100 0 1 235 3719 3485 Colpoda sp. isolate JGP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 21283 429 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
6728983 6728983 PRJNA1245487_P_NODE_2686_length_756_cov_2.301611_g2379_i0 PRJNA1245487 2686 756 2.301611 17.40017916 Epispathidium amphoriforme 114794 SAR_Eukaryotes SAR_Eukaryotes 1192 0   NTclustered gi|6980029|gb|AF223570.1|AF223570 114794 g2379 i0 95.219 91.0436507936508 753 36 99 0 4 756 2359 1607 Spathidium amphoriforme internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 68829 1192 1 Eukaryota Sar   Ciliophora Litostomatea Haptorida Spathidiidae Epispathidium Epispathidium amphoriforme
9279264 9279264 PRJNA1245487_P_NODE_13908_length_306_cov_2.695279_g13570_i0 PRJNA1245487 13908 306 2.695279 8.24755374 Opercularia sp. ZhW-2019a 2582953 SAR_Eukaryotes SAR_Eukaryotes 564 2.96e-156   NTclustered gi|2304601486|gb|OP458307.1| 2582953 g13570 i0 100 98.5457516339869 305 0 99 0 2 306 391 87 Opercularia sp. ZhW-2019a large subunit ribosomal RNA gene, partial sequence blastn 30155 564 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Operculariidae Opercularia Opercularia sp. ZhW-2019a
10555195 10555195 PRJNA1245487_P_NODE_18589_length_257_cov_1.385870_g18251_i0 PRJNA1245487 18589 257 1.38587 3.5616859 Colpoda sp. 41631 SAR_Eukaryotes SAR_Eukaryotes 442 1.1899999999999995e-119   NTclustered gi|2651357791|gb|PP174306.1| 41631 g18251 i0 97.665 81.1828793774319 257 6 100 0 1 257 3218 3474 Colpoda sp. isolate JGP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 20864 442 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
10555234 10555234 PRJNA1245487_P_NODE_21729_length_243_cov_0.917647_g21391_i0 PRJNA1245487 21729 243 0.917647 2.22988221 Colpoda sp. 41631 SAR_Eukaryotes SAR_Eukaryotes 385 1.8999999999999993e-102   NTclustered gi|2651357791|gb|PP174306.1| 41631 g21391 i0 96.17 4.1522633744856 235 9 97 0 9 243 3604 3370 Colpoda sp. isolate JGP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1009 385 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
11829631 11829631 PRJNA1245487_P_NODE_11690_length_342_cov_6.936803_g11352_i0 PRJNA1245487 11690 342 6.936803 23.72386626 Colpoda sp. 2-SMaurya-2022 3384729 SAR_Eukaryotes SAR_Eukaryotes 599 9.21e-167   NTclustered gi|2178724620|gb|OM278536.1| 3384729 g11352 i0 98.246 99.4853801169591 342 6 100 0 1 342 924 583 Colpoda sp. 2-SMaurya-2022 strain J21 small subunit ribosomal RNA gene, partial sequence blastn 34024 599 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp. 2-SMaurya-2022
12530051 12530051 PRJNA1245487_P_NODE_23450_length_205_cov_5.151515_g23112_i0 PRJNA1245487 23450 205 5.151515 10.56060575 Litostomatea 5988 SAR_Eukaryotes SAR_Eukaryotes 307 3.4600000000000006e-79   NTclustered gi|6980029|gb|AF223570.1|AF223570 114794 g23112 i0 93.72 102.380487804878 207 10 100 3 1 205 2966 2761 Spathidium amphoriforme internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 20988 307 1 Eukaryota Sar   Ciliophora Litostomatea Haptorida Spathidiidae Epispathidium Epispathidium amphoriforme
14380243 14380243 PRJNA1245487_P_NODE_19092_length_253_cov_0.866667_g18754_i0 PRJNA1245487 19092 253 0.866667 2.19266751 Ephelota gemmipara 398671 SAR_Eukaryotes SAR_Eukaryotes 193 1.3e-44   NTclustered gi|759083541|gb|KM222158.1| 398671 g18754 i0 84.08 83.4387351778656 201 31 79 1 53 253 1721 1522 Ephelota gemmipara voucher CXR2007051101 large subunit ribosomal RNA gene, partial sequence blastn 21110 193 1 Eukaryota Sar   Ciliophora Phyllopharyngea Exogenida Ephelotidae Ephelota Ephelota gemmipara
15654156 15654156 PRJNA1245487_P_NODE_22853_length_230_cov_2.242038_g22515_i0 PRJNA1245487 22853 230 2.242038 5.1566874 Pseudochilodonopsis fluviatilis 1170556 SAR_Eukaryotes SAR_Eukaryotes 137 5.51e-28   NTclustered gi|1183126452|gb|KX302663.1| 1170556 g22515 i0 84.783 0.6 138 20 60 1 2 139 772 636 Pseudochilodonopsis fluviatilis clone A378 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 138 137 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Pseudochilodonopsis Pseudochilodonopsis fluviatilis
20177431 20177431 PRJNA1245487_P_NODE_14116_length_303_cov_3.456522_g13778_i0 PRJNA1245487 14116 303 3.456522 10.47326166 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 544 3.82e-150   NTclustered gi|2651357791|gb|PP174306.1| 41631 g13778 i0 99.01 98.1650165016502 303 3 100 0 1 303 2072 1770 Colpoda sp. isolate JGP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 29744 549 0.990892531876138 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
21453232 21453232 PRJNA1245487_P_NODE_22437_length_236_cov_2.699387_g22099_i0 PRJNA1245487 22437 236 2.699387 6.37055332 Oligohymenophorea 6020 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|390988043|gb|JN885111.1| 35097 g22099 i0 100 0.978813559322034 29 0 12 0 42 70 1675 1703 Cohnilembus verminus isolate FXP2009051101 large subunit ribsomal RNA gene, partial sequence blastn 231 54.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Cohnilembidae Cohnilembus Cohnilembus verminus
24577452 24577452 PRJNA1245487_P_NODE_22360_length_237_cov_4.445122_g22022_i0 PRJNA1245487 22360 237 4.445122 10.53493914 Sterkiella histriomuscorum 94289 SAR_Eukaryotes SAR_Eukaryotes 156 1.58e-33   NTclustered gi|220966760|gb|FJ545743.1| 94289 g22022 i0 79.253 39.535864978903 241 37 98 11 1 232 7115 7351 Sterkiella histriomuscorum 17S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence; macronuclear blastn 9370 156 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Sterkiella Sterkiella histriomuscorum
24577489 24577489 PRJNA1245487_P_NODE_5520_length_532_cov_6.028322_g5185_i0 PRJNA1245487 5520 532 6.028322 32.07067304 Colpoda sp. 41631 SAR_Eukaryotes SAR_Eukaryotes 854 0   NTclustered gi|2651357788|gb|PP174303.1| 41631 g5185 i0 95.857 88.5770676691729 531 17 99 5 4 532 3887 3360 Colpoda sp. isolate CIL1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 47123 854 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
26598467 26598467 PRJNA1245487_P_NODE_8781_length_409_cov_3.297619_g8443_i0 PRJNA1245487 8781 409 3.297619 13.48726171 Stentor coeruleus 5963 SAR_Eukaryotes SAR_Eukaryotes 63.2 3.07e-9   NR OMJ89086.1 5963 g8443 i0 40.5 0.579462102689487 79 47 57.9 0 247 11 5 83 OMJ89086.1 hypothetical protein SteCoe_8807 [Stentor coeruleus] diamond 237 63.2 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;