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contig_metadata

21 rows where bioproject = "PRJNA1245487", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 21 ✖

tax_clade 1

  • Sar · 21 ✖

bioproject 1

  • PRJNA1245487 · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1625726 1625726 PRJNA1245487_P_NODE_12002_length_336_cov_4.463878_g11664_i0 PRJNA1245487 12002 336 4.463878 14.99863008 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 274 6.21e-69   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g11664 i0 93.122 58.0297619047619 189 10 55 3 151 336 3846 3658 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 19498 274 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
1625739 1625739 PRJNA1245487_P_NODE_13062_length_319_cov_2.174797_g12724_i0 PRJNA1245487 13062 319 2.174797 6.93760243 Protaspis grandis 361427 SAR_Eukaryotes SAR_Eukaryotes 329 1.23e-85   NTclustered gi|290760486|gb|GQ144689.1| 361427 g12724 i0 85.58 92.4670846394984 319 41 99 4 1 316 1657 1973 Protaspis grandis large subunit ribosomal RNA gene, partial sequence blastn 29497 329 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Protaspis Protaspis grandis
1625856 1625856 PRJNA1245487_P_NODE_22762_length_231_cov_3.518987_g22424_i0 PRJNA1245487 22762 231 3.518987 8.12885997 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 427 2.9399999999999998e-115   NTclustered gi|33309639|gb|AF411276.1| 188950 g22424 i0 100 83.051948051948 231 0 100 0 1 231 1475 1705 Bodomorpha minima 18S ribosomal RNA gene, complete sequence blastn 19185 427 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
2902018 2902018 PRJNA1245487_P_NODE_4163_length_615_cov_1.590406_g3833_i0 PRJNA1245487 4163 615 1.590406 9.7809969 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 1024 0   NTclustered gi|238617630|gb|FJ973394.1| 188950 g3833 i0 98.951 97.219512195122 572 6 93 0 44 615 837 266 Bodomorpha minima strain ATCC 50339 actin (act) gene, partial cds blastn 59790 1024 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
4178348 4178348 PRJNA1245487_P_NODE_19524_length_251_cov_1.668539_g19186_i0 PRJNA1245487 19524 251 1.668539 4.18803289 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 464 2.47e-126   NTclustered gi|238617602|gb|FJ973377.1| 188950 g19186 i0 100 32.1354581673307 251 0 100 0 1 251 2149 2399 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 8066 464 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
5454535 5454535 PRJNA1245487_P_NODE_15965_length_281_cov_2.750000_g15627_i0 PRJNA1245487 15965 281 2.75 7.7275 Rosculus vulgaris 2231165 SAR_Eukaryotes SAR_Eukaryotes 357 4.9e-94   NTclustered gi|1402550474|gb|MH488760.1| 2231165 g15627 i0 89.716 34.864768683274 282 26 100 2 1 281 2503 2224 Rosculus vulgaris isolate CCA sequence blastn 9797 357 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus vulgaris
5454655 5454655 PRJNA1245487_P_NODE_6065_length_507_cov_2.497696_g5729_i0 PRJNA1245487 6065 507 2.497696 12.66331872 Phytocercomonas venanatans 2065209 SAR_Eukaryotes SAR_Eukaryotes 228 7.679999999999999e-55   NTclustered gi|1315527750|gb|MF034900.1| 2065209 g5729 i0 75.911 27.465483234714 494 92 96 17 1 485 7820 8295 Phytocercomonas venanatans 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 13925 228 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Phytocercomonas Phytocercomonas venanatans
6728827 6728827 PRJNA1245487_P_NODE_12566_length_327_cov_3.937008_g12228_i0 PRJNA1245487 12566 327 3.937008 12.87401616 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 604 1.8799999999999993e-168   NTclustered gi|238617602|gb|FJ973377.1| 188950 g12228 i0 100 100.207951070336 327 0 100 0 1 327 19 345 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 32768 604 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
6728837 6728837 PRJNA1245487_P_NODE_13746_length_309_cov_1.673729_g13408_i0 PRJNA1245487 13746 309 1.673729 5.17182261 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 571 1.7899999999999995e-158   NTclustered gi|238617602|gb|FJ973377.1| 188950 g13408 i0 100 23.4563106796117 309 0 100 0 1 309 357 665 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 7248 571 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
6728990 6728990 PRJNA1245487_P_NODE_4706_length_578_cov_2.994059_g4374_i0 PRJNA1245487 4706 578 2.994059 17.30566102 Rosculus sp. VDelafont-2023a 3079709 SAR_Eukaryotes SAR_Eukaryotes 1057 0   NTclustered gi|2589370978|gb|OR644361.1| 3079709 g4374 i0 99.654 43.742214532872 578 2 100 0 1 578 1506 2083 Rosculus sp. VDelafont-2023a isolate AJ1 small subunit ribosomal RNA gene, partial sequence blastn 25283 1057 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus sp. VDelafont-2023a
6728991 6728991 PRJNA1245487_P_NODE_486_length_1476_cov_5.569494_g339_i0 PRJNA1245487 486 1476 5.569494 82.20573144 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 546 7.069999999999999e-190   NR MES1909605.1 1215613 g339 i0 74.1 3.65853658536585 352 91 71.5 0 1475 420 82 433 MES1909605.1 hypothetical protein [Cercozoa sp. M6MM] diamond 5400 548 0.996350364963504 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
6729001 6729001 PRJNA1245487_P_NODE_5966_length_511_cov_1.105023_g5630_i0 PRJNA1245487 5966 511 1.105023 5.64666753 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 251 3.77e-81   NR ADK26624.1 323453 g5630 i0 77.4 0.933463796477495 159 36 93.3 0 6 482 118 276 ADK26624.1 elongation factor 2, partial [Heteromita sp. PRA-74] diamond 477 251 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
9979451 9979451 PRJNA1245487_P_NODE_22428_length_236_cov_2.932515_g22090_i0 PRJNA1245487 22428 236 2.932515 6.9207354 Imbricatea 1736114 SAR_Eukaryotes SAR_Eukaryotes 261 3.23e-65   NTclustered gi|238617602|gb|FJ973377.1| 188950 g22090 i0 99.306 75.0805084745763 144 1 61 0 1 144 3274 3417 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 17719 261 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
13104983 13104983 PRJNA1245487_P_NODE_18071_length_261_cov_3.047872_g17733_i0 PRJNA1245487 18071 261 3.047872 7.95494592 Rosculus sp. VDelafont-2023a 3079709 SAR_Eukaryotes SAR_Eukaryotes 483 7.12e-132   NTclustered gi|2589370978|gb|OR644361.1| 3079709 g17733 i0 100 34.4942528735632 261 0 100 0 1 261 1112 1372 Rosculus sp. VDelafont-2023a isolate AJ1 small subunit ribosomal RNA gene, partial sequence blastn 9003 483 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus sp. VDelafont-2023a
14380273 14380273 PRJNA1245487_P_NODE_21352_length_244_cov_1.637427_g21014_i0 PRJNA1245487 21352 244 1.637427 3.99532188 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 75 4.7e-9   NTclustered gi|88792583|gb|DQ386164.1| 372086 g21014 i0 84.615 14.3524590163934 78 9 32 3 98 175 1825 1751 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 3502 75 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
15654009 15654009 PRJNA1245487_P_NODE_10933_length_357_cov_2.373239_g10595_i0 PRJNA1245487 10933 357 2.373239 8.47246323 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 324 6.49e-84   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g10595 i0 84.034 12.859943977591 357 36 99 10 1 356 3685 4021 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 4591 324 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
16928216 16928216 PRJNA1245487_P_NODE_10574_length_364_cov_4.704467_g10236_i0 PRJNA1245487 10574 364 4.704467 17.12425988 Glissomonad sp. Panama103 563749 SAR_Eukaryotes SAR_Eukaryotes 671 0   NTclustered gi|219524909|gb|EU709272.1| 563749 g10236 i0 100 70.9615384615385 363 0 99 0 1 363 499 861 Glissomonad sp. Panama103 18S ribosomal RNA gene, partial sequence blastn 25830 671 1 Eukaryota Sar   Cercozoa         Glissomonad sp. Panama103
16928330 16928330 PRJNA1245487_P_NODE_19774_length_250_cov_1.762712_g19436_i0 PRJNA1245487 19774 250 1.762712 4.40678 Glissomonad sp. Panama103 563749 SAR_Eukaryotes SAR_Eukaryotes 457 4.1099999999999985e-124   NTclustered gi|219524909|gb|EU709272.1| 563749 g19436 i0 99.6 99.856 250 1 100 0 1 250 266 17 Glissomonad sp. Panama103 18S ribosomal RNA gene, partial sequence blastn 24964 457 1 Eukaryota Sar   Cercozoa         Glissomonad sp. Panama103
18202780 18202780 PRJNA1245487_P_NODE_1615_length_935_cov_7.259861_g1344_i0 PRJNA1245487 1615 935 7.259861 67.87970035 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 486 2.1899999999999998e-132   NTclustered gi|88792583|gb|DQ386164.1| 372086 g1344 i0 83.152 57.8427807486631 552 74 59 16 204 751 1400 864 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 54083 486 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
19477137 19477137 PRJNA1245487_P_NODE_14796_length_294_cov_2.751131_g14458_i0 PRJNA1245487 14796 294 2.751131 8.08832514 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 521 1.7299999999999995e-143   NTclustered gi|238617602|gb|FJ973377.1| 188950 g14458 i0 98.639 101.387755102041 294 4 100 0 1 294 2970 2677 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 29808 521 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
24577336 24577336 PRJNA1245487_P_NODE_13120_length_318_cov_2.089796_g12782_i0 PRJNA1245487 13120 318 2.089796 6.64555128 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 272 2.0999999999999997e-68   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g12782 i0 83.072 53.2138364779874 319 35 99 12 4 318 4001 3698 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 16922 272 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;