RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1245487", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1245487 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18202802 18202802 PRJNA1245487_P_NODE_18015_length_262_cov_1.650794_g17677_i0 PRJNA1245487 18015 262 1.650794 4.32508028 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 70.5 5.15e-13   NR XP_013333232.1 5804 g17677 i0 54.9 4.31679389312977 71 31 81.3 1 233 21 57 126 XP_013333232.1 R1 protein, putative [Eimeria maxima] diamond 1131 70.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
20177727 20177727 PRJNA1245487_P_NODE_8276_length_424_cov_7.433048_g7938_i0 PRJNA1245487 8276 424 7.433048 31.51612352 root 1 Root_unresolved Root_unresolved 56.5 0.003   NTclustered gi|84997470|ref|XM_948364.1| 5874 g7938 i0 100 0.148584905660377 30 0 7 0 305 334 381 352 Theileria annulata uncharacterized protein (TA11355), partial mRNA blastn 63 56.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria annulata
29302202 29302202 PRJNA1245487_P_NODE_14489_length_298_cov_1.835556_g14151_i0 PRJNA1245487 14489 298 1.835556 5.46995688 Cryptosporidium 5806 SAR_Eukaryotes SAR_Eukaryotes 91.3 7.27e-20   NR XP_625504.1 353152 g14151 i0 60.5 1.53020134228188 76 30 76.5 0 297 70 183 258 XP_625504.1 60S ribosomal protein L7A, partial [Cryptosporidium parvum Iowa II] diamond 456 92 0.992391304347826 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;