RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA1242190" and tax_phylum = "Thermodesulfobacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1242190 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20752419 20752419 PRJNA1242190_S_NODE_2017_length_506_cov_1.080831_g2010_i0 PRJNA1242190 2017 506 1.080831 5.46900486 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 177 6.689999999999999e-54   NR GJM17744.1 2202153 g2010 i0 73.3 0.687747035573123 116 31 68.8 0 1 348 12 127 GJM17744.1 MAG: hypothetical protein DHS20C13_30710 [Thermodesulfobacteriota bacterium] diamond 348 177 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
29568171 29568171 PRJNA1242190_S_NODE_14070_length_227_cov_3.318182_g14063_i0 PRJNA1242190 14070 227 3.318182 7.53227314 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 88.2 4.8e-21   NR GJM17324.1 2202153 g14063 i0 76.5 0.674008810572687 51 12 67.4 0 226 74 21 71 GJM17324.1 MAG: hypothetical protein DHS20C13_26510 [Thermodesulfobacteriota bacterium] diamond 153 88.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;