RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1242190", tax_kingdom = "Fungi" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1242190 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30199725 30199725 PRJNA1242190_S_NODE_5232_length_359_cov_2.146853_g5225_i0 PRJNA1242190 5232 359 2.146853 7.70720227 Gongronella butleri 101105 Fungi Fungi 57.4 5.23e-7   NR KAI8074562.1 101105 g5225 i0 46.9 1.65459610027855 49 24 40.9 1 338 192 183 229 KAI8074562.1 glycoside hydrolase superfamily, partial [Gongronella butleri] diamond 594 57.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Gongronella Gongronella butleri
31590754 31590754 PRJNA1242190_S_NODE_13576_length_243_cov_0.894118_g13569_i0 PRJNA1242190 13576 243 0.894118 2.17270674 Mortierella sp. GBA43 1896190 Fungi Fungi 41.2 0.0477   NR KAG0224522.1 1896190 g13569 i0 66.7 0.296296296296296 24 8 29.6 0 239 168 94 117 KAG0224522.1 60S ribosomal protein L22-3 [Mortierella sp. GBA43] diamond 72 41.2 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Mortierella Mortierella sp. GBA43

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;