RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1242190", tax_clade = "Opisthokonta" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 4 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 4 ✖

bioproject 1

  • PRJNA1242190 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9979080 9979080 PRJNA1242190_S_NODE_3328_length_430_cov_4.249300_g3321_i0 PRJNA1242190 3328 430 4.2493 18.27199 Chytridiales sp. JEL 2011832 Fungi Fungi 124 1.51e-33   NR KAJ3416086.1 2786947 g3321 i0 60.6 4.06046511627907 99 39 69.1 0 422 126 25 123 KAJ3416086.1 60S ribosomal protein L30 [Chytridiales sp. JEL 0842] diamond 1746 124 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales     Chytridiales sp. JEL 0842
27768786 27768786 PRJNA1242190_S_NODE_1524_length_543_cov_3.719149_g1517_i0 PRJNA1242190 1524 543 3.719149 20.19497907 Powellomyces hirtus 109895 Fungi Fungi 152 5.47e-44   NR KAI8920797.1 109895 g1517 i0 69.4 1.77348066298343 108 33 59.7 0 2 325 17 124 KAI8920797.1 ribosomal protein S27a, partial [Powellomyces hirtus] diamond 963 152 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Powellomyces Powellomyces hirtus
28052641 28052641 PRJNA1242190_S_NODE_3045_length_444_cov_3.703504_g3038_i0 PRJNA1242190 3045 444 3.703504 16.44355776 Cladochytrium tenue 1604274 Fungi Fungi 151 5.48e-44   NR KAJ1568147.1 1604274 g3038 i0 60.9 2.62837837837838 128 50 86.5 0 438 55 4 131 KAJ1568147.1 60S ribosomal protein L32 [Cladochytrium tenue] diamond 1167 151 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Cladochytriaceae Cladochytrium Cladochytrium tenue
29649116 29649116 PRJNA1242190_S_NODE_5450_length_353_cov_8.507143_g5443_i0 PRJNA1242190 5450 353 8.507143 30.03021479 Fungi 4751 Fungi Fungi 119 5.25e-32   NR KAI9008584.1 82268 g5443 i0 59.6 24.4759206798867 94 38 79.9 0 18 299 13 106 KAI9008584.1 50S ribosomal protein L30e-like protein [Hyaloraphidium curvatum] diamond 8640 119 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;