RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1241156" and tax_phylum = "Nemertea"

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tax_superkingdom 1

tax_phylum 1

  • Nemertea · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1241156 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30628587 30628587 PRJNA1241156_S_NODE_7293_length_455_cov_3.830097_g6842_i0 PRJNA1241156 7293 455 3.830097 17.42694135 Metazoa 33208 Nemertea other_Eukaryota 73.9 3.55e-12   NR XP_064622951.1 88925 g6842 i0 70 1.18021978021978 50 8 28.4 1 14 142 164 213 XP_064622951.1 creatine kinase B-type-like [Lineus longissimus] diamond 537 74.3 0.994616419919246 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;