RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA1241156" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1241156 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2900859 2900859 PRJNA1241156_S_NODE_45383_length_288_cov_1.310204_g44923_i0 PRJNA1241156 45383 288 1.310204 3.77338752 Eunicella cavolini 317547 Cnidaria other_Eukaryota 52.8 0.027   NTclustered gi|2918369555|emb|OZ237727.1| 317547 g44923 i0 100 0.291666666666667 28 0 10 0 27 54 8045961 8045934 Eunicella cavolini genome assembly, chromosome: 11 blastn 84 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
11828365 11828365 PRJNA1241156_S_NODE_24010_length_350_cov_5.540717_g23550_i0 PRJNA1241156 24010 350 5.540717 19.3925095 Eunicella cavolini 317547 Cnidaria other_Eukaryota 56.5 0.003   NTclustered gi|2918369565|emb|OZ237731.1| 317547 g23550 i0 92.308 0.911428571428571 39 3 11 0 87 125 934011 934049 Eunicella cavolini genome assembly, chromosome: 15 blastn 319 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
14378745 14378745 PRJNA1241156_S_NODE_22732_length_355_cov_2.301282_g22272_i0 PRJNA1241156 22732 355 2.301282 8.1695511 Hydra vulgaris 6087 Cnidaria other_Eukaryota 52.8 0.034   NTclustered gi|2744850920|ref|XM_065792695.1| 6087 g22272 i0 100 0.0788732394366197 28 0 8 0 18 45 144 117 PREDICTED: Hydra vulgaris germinal-center associated nuclear protein (LOC101237473), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
15652818 15652818 PRJNA1241156_S_NODE_31953_length_324_cov_7.163701_g31493_i0 PRJNA1241156 31953 324 7.163701 23.21039124 Eunicella cavolini 317547 Cnidaria other_Eukaryota 54.7 0.008   NTclustered gi|2918369553|emb|OZ237725.1| 317547 g31493 i0 100 0.0895061728395062 29 0 9 0 143 171 1429757 1429729 Eunicella cavolini genome assembly, chromosome: 9 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
16927209 16927209 PRJNA1241156_S_NODE_41814_length_297_cov_6.157480_g41354_i0 PRJNA1241156 41814 297 6.15748 18.2877156 Acropora muricata 159855 Cnidaria other_Eukaryota 52.8 0.028   NTclustered gi|2784647305|ref|XM_067174708.1| 159855 g41354 i0 100 0.0942760942760943 28 0 9 0 142 169 3018 2991 PREDICTED: Acropora muricata tetratricopeptide repeat protein 28-like (LOC136908186), transcript variant X1, mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora muricata
19475832 19475832 PRJNA1241156_S_NODE_27776_length_337_cov_5.741497_g27316_i0 PRJNA1241156 27776 337 5.741497 19.34884489 Eunicella cavolini 317547 Cnidaria other_Eukaryota 56.5 0.002   NTclustered gi|2918369555|emb|OZ237727.1| 317547 g27316 i0 100 0.0890207715133531 30 0 9 0 224 253 16655794 16655765 Eunicella cavolini genome assembly, chromosome: 11 blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
29189519 29189519 PRJNA1241156_S_NODE_10569_length_418_cov_6.701333_g10113_i0 PRJNA1241156 10569 418 6.701333 28.01157194 Acropora cervicornis 6130 Cnidaria other_Eukaryota 47.8 0.00235   NR KAK2554295.1 6130 g10113 i0 60 0.215311004784689 30 12 21.5 0 49 138 83 112 KAK2554295.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Acropora cervicornis] diamond 90 47.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora cervicornis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;