RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA1241156" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA1241156 · 7 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1625053 1625053 PRJNA1241156_S_NODE_6982_length_460_cov_2.119904_g6531_i0 PRJNA1241156 6982 460 2.119904 9.7515584 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 318 3.99e-82   NTclustered gi|1624698156|ref|XM_029013946.1| 189622 g6531 i0 91.81 43.5869565217391 232 13 50 5 217 447 186 412 Babesia ovata CTP synthase, putative (BOVATA_050290), partial mRNA blastn 20050 318 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
6727413 6727413 PRJNA1241156_S_NODE_15766_length_384_cov_10.278592_g15306_i0 PRJNA1241156 15766 384 10.278592 39.46979328 Plasmodium gonderi 77519 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.01   NTclustered gi|1620947434|ref|XM_028685783.1| 77519 g15306 i0 96.875 0.166666666666667 32 1 8 0 101 132 456 425 Plasmodium gonderi cactin homolog (PGO_011430), partial mRNA blastn 64 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gonderi
14378953 14378953 PRJNA1241156_S_NODE_35112_length_315_cov_10.643382_g34652_i0 PRJNA1241156 35112 315 10.643382 33.5266533 Babesia bigemina 5866 SAR_Eukaryotes SAR_Eukaryotes 446 1.16e-120   NTclustered gi|833494855|ref|XM_012915027.1| 5866 g34652 i0 92.114 317.780952380952 317 23 100 2 1 315 144 460 Babesia bigemina hypothetical protein, conserved partial mRNA blastn 100101 446 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina
14379473 14379473 PRJNA1241156_S_NODE_70732_length_227_cov_2.842391_g70272_i0 PRJNA1241156 70732 227 2.842391 6.45222757 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 316 6.489999999999998e-82   NTclustered gi|1624698156|ref|XM_029013946.1| 189622 g70272 i0 92.411 27.8370044052863 224 14 99 3 3 226 257 477 Babesia ovata CTP synthase, putative (BOVATA_050290), partial mRNA blastn 6319 316 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
16927584 16927584 PRJNA1241156_S_NODE_66934_length_239_cov_2.367347_g66474_i0 PRJNA1241156 66934 239 2.367347 5.65795933 Plasmodium gonderi 77519 SAR_Eukaryotes SAR_Eukaryotes 60.2 1.28e-4   NTclustered gi|1620953792|ref|XM_028688957.1| 77519 g66474 i0 97.143 1.16317991631799 35 1 15 0 66 100 1205 1171 Plasmodium gonderi nucleolar complex protein 2 (PGO_121630), partial mRNA blastn 278 60.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gonderi
17628519 17628519 PRJNA1241156_S_NODE_5994_length_479_cov_11.451835_g5546_i0 PRJNA1241156 5994 479 11.451835 54.85428965 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 640 7.83e-179   NTclustered gi|833494855|ref|XM_012915027.1| 5866 g5546 i0 91.295 1406.1503131524 471 38 98 3 1 469 563 94 Babesia bigemina hypothetical protein, conserved partial mRNA blastn 673546 645 0.992248062015504 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina
18902241 18902241 PRJNA1241156_S_NODE_49095_length_278_cov_3.187234_g48635_i0 PRJNA1241156 49095 278 3.187234 8.86051052 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.026   NTclustered gi|2785758489|ref|XM_067219727.1| 5824 g48635 i0 100 0.201438848920863 28 0 10 0 229 256 5398 5425 Plasmodium brasilianum patatin-like phospholipase (MKS88_001072), partial mRNA blastn 56 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium brasilianum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;