RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1241156", tax_kingdom = "Fungi" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 1 ✖

tax_kingdom 1

  • Fungi · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA1241156 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19476383 19476383 PRJNA1241156_S_NODE_66816_length_239_cov_4.591837_g66356_i0 PRJNA1241156 66816 239 4.591837 10.97449043 Chytriomyces cf. hyalinus JEL632 1907226 Fungi Fungi 135 6.4699999999999995e-37   NR KAI8839109.1 1907226 g66356 i0 87.3 6.94142259414226 79 10 99.2 0 3 239 92 170 KAI8839109.1 hypothetical protein BJ741DRAFT_599982 [Chytriomyces cf. hyalinus JEL632] diamond 1659 135 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Chytriomyces Chytriomyces cf. hyalinus JEL632

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;