RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1241156", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA1241156 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28305252 28305252 PRJNA1241156_S_NODE_46986_length_284_cov_1.302905_g46526_i0 PRJNA1241156 46986 284 1.302905 3.7002502 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 82 6.9e-16   NR MDE2027097.1 2035772 g46526 i0 47.1 0.897887323943662 85 44 89.8 1 268 14 160 243 MDE2027097.1 glycosyltransferase [Candidatus Omnitrophota bacterium] diamond 255 82 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32065000 32065000 PRJNA1241156_S_NODE_31318_length_326_cov_5.561837_g30858_i0 PRJNA1241156 31318 326 5.561837 18.13158862 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 50.8 1.26e-4   NR MCG8432288.1 2035772 g30858 i0 34.8 0.634969325153374 69 45 63.5 0 73 279 168 236 MCG8432288.1 endonuclease/exonuclease/phosphatase family protein [Candidatus Omnitrophota bacterium] diamond 207 50.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;