RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1241156", tax_clade = "Opisthokonta" and tax_phylum = "Hemichordata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Hemichordata · 4 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 4 ✖

bioproject 1

  • PRJNA1241156 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8003225 8003225 PRJNA1241156_S_NODE_37467_length_309_cov_4.131579_g37007_i0 PRJNA1241156 37467 309 4.131579 12.76657911 Ptychodera flava 63121 Hemichordata other_Eukaryota 58.4 6.2e-4   NTclustered gi|2875739948|ref|XM_070700118.1| 63121 g37007 i0 100 0.100323624595469 31 0 10 0 263 293 3459 3429 PREDICTED: Ptychodera flava monocarboxylate transporter 13-like (LOC139133491), mRNA blastn 31 58.4 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava
27263308 27263308 PRJNA1241156_S_NODE_55823_length_262_cov_5.187215_g55363_i0 PRJNA1241156 55823 262 5.187215 13.5905033 Saccoglossus kowalevskii 10224 Hemichordata other_Eukaryota 53.1 1.02e-5   NR XP_006826086.1 10224 g55363 i0 45.6 0.652671755725191 57 30 64.1 1 87 254 1156 1212 XP_006826086.1 PREDICTED: uncharacterized protein LOC102808992 [Saccoglossus kowalevskii] diamond 171 53.1 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii
27894729 27894729 PRJNA1241156_S_NODE_6365_length_472_cov_2.496503_g5917_i0 PRJNA1241156 6365 472 2.496503 11.78349416 Saccoglossus kowalevskii 10224 Hemichordata other_Eukaryota 84 1.99e-15   NR XP_006826086.1 10224 g5917 i0 47.3 0.591101694915254 93 46 57.2 2 104 373 1068 1160 XP_006826086.1 PREDICTED: uncharacterized protein LOC102808992 [Saccoglossus kowalevskii] diamond 279 84 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii
32033459 32033459 PRJNA1241156_S_NODE_36958_length_310_cov_8.374532_g36498_i0 PRJNA1241156 36958 310 8.374532 25.9610492 Saccoglossus kowalevskii 10224 Hemichordata other_Eukaryota 44.7 0.0174   NR XP_006826086.1 10224 g36498 i0 41.7 0.464516129032258 48 28 46.5 0 179 36 1171 1218 XP_006826086.1 PREDICTED: uncharacterized protein LOC102808992 [Saccoglossus kowalevskii] diamond 144 44.7 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;