contig_metadata
1 row where bioproject = "PRJNA1241156" and tax_clade = "Human endogenous retroviruses"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27294830 | 27294830 | PRJNA1241156_S_NODE_48243_length_280_cov_4.987342_g47783_i0 | PRJNA1241156 | 48243 | 280 | 4.987342 | 13.9645576 | Human endogenous retrovirus K | 45617 | Viruses | Viruses | 70.5 | 1.04e-11 | NR | CAA76882.1 | 45617 | g47783 | i0 | 49.3 | 4.82142857142857 | 75 | 38 | 80.4 | 0 | 235 | 11 | 199 | 273 | CAA76882.1 pol protein [Human endogenous retrovirus K] | diamond | 1350 | 71.2 | 0.990168539325843 | Viruses | Human endogenous retroviruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Human endogenous retrovirus K |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;