contig_metadata
8 rows where bioproject = "PRJNA1241156" and tax_clade = "Bacteria candidate phyla"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5453401 | 5453401 | PRJNA1241156_S_NODE_3765_length_554_cov_4.461840_g3354_i0 | PRJNA1241156 | 3765 | 554 | 4.46184 | 24.7185936 | Candidatus Saccharibacteria genomosp. TM7-H1 | 2080739 | Bacteria | Bacteria | 1007 | 0 | NTclustered | gi|1566427536|gb|CP026537.1| | 2080739 | g3354 | i0 | 99.458 | 64.5649819494585 | 554 | 3 | 100 | 0 | 1 | 554 | 543121 | 543674 | Candidatus Saccharibacteria genomosp. TM7-H1 isolate E1 chromosome | blastn | 35769 | 1007 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharibacteria genomosp. TM7-H1 | ||||||
| 8003256 | 8003256 | PRJNA1241156_S_NODE_3987_length_543_cov_5.210000_g3568_i0 | PRJNA1241156 | 3987 | 543 | 5.21 | 28.2903 | Candidatus Dojkabacteria bacterium | 2099670 | Bacteria | Bacteria | 58.4 | 0.001 | NTclustered | gi|2556884375|gb|CP129470.1| | 2099670 | g3568 | i0 | 94.595 | 0.0681399631675875 | 37 | 2 | 7 | 0 | 405 | 441 | 557346 | 557382 | MAG: Candidatus Dojkabacteria bacterium isolate cMAG.26 chromosome, complete genome | blastn | 37 | 58.4 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Dojkabacteria bacterium | |||||||
| 10554020 | 10554020 | PRJNA1241156_S_NODE_36789_length_311_cov_3.003731_g36329_i0 | PRJNA1241156 | 36789 | 311 | 3.003731 | 9.34160341 | Candidatus Saccharibacteria genomosp. TM7-H1 | 2080739 | Bacteria | Bacteria | 575 | 1.3899999999999995e-159 | NTclustered | gi|1566427536|gb|CP026537.1| | 2080739 | g36329 | i0 | 100 | 296.093247588424 | 311 | 0 | 100 | 0 | 1 | 311 | 542578 | 542888 | Candidatus Saccharibacteria genomosp. TM7-H1 isolate E1 chromosome | blastn | 92085 | 575 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharibacteria genomosp. TM7-H1 | ||||||
| 28368323 | 28368323 | PRJNA1241156_S_NODE_68086_length_235_cov_5.572917_g67626_i0 | PRJNA1241156 | 68086 | 235 | 5.572917 | 13.09635495 | Candidatus Saccharibacteria bacterium | 2026720 | Bacteria | Bacteria | 55.5 | 5.63e-7 | NR | TAH34838.1 | 2026720 | g67626 | i0 | 37.1 | 0.893617021276596 | 70 | 43 | 88.1 | 1 | 28 | 234 | 84 | 153 | TAH34838.1 MAG: hypothetical protein EYC59_02885 [Candidatus Saccharibacteria bacterium] | diamond | 210 | 55.5 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium | ||||||
| 30926860 | 30926860 | PRJNA1241156_S_NODE_53274_length_268_cov_2.760000_g52814_i0 | PRJNA1241156 | 53274 | 268 | 2.76 | 7.3968 | Candidatus Rifleibacteriota bacterium | 2053586 | Bacteria | Bacteria | 46.2 | 0.00243 | NR | MBU1107592.1 | 2053586 | g52814 | i0 | 38.5 | 0.727611940298508 | 65 | 28 | 72.8 | 2 | 43 | 237 | 149 | 201 | MBU1107592.1 class I SAM-dependent methyltransferase [Candidatus Rifleibacteriota bacterium] | diamond | 195 | 46.2 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Rifleibacteriota | Candidatus Rifleibacteriota bacterium | ||||||
| 31418831 | 31418831 | PRJNA1241156_S_NODE_27436_length_338_cov_6.671186_g26976_i0 | PRJNA1241156 | 27436 | 338 | 6.671186 | 22.54860868 | Bacteria | 2 | Bacteria | Bacteria | 135 | 4.19e-36 | NR | OQB10761.1 | 1852939 | g26976 | i0 | 55.2 | 1.87278106508876 | 105 | 47 | 93.2 | 0 | 329 | 15 | 2 | 106 | OQB10761.1 MAG: hypothetical protein BWY21_00051 [Parcubacteria group bacterium ADurb.Bin216] | diamond | 633 | 136 | 0.992647058823529 | Bacteria | Bacteria candidate phyla | Parcubacteria group bacterium ADurb.Bin216 | |||||||
| 32318527 | 32318527 | PRJNA1241156_S_NODE_29439_length_332_cov_4.816609_g28979_i0 | PRJNA1241156 | 29439 | 332 | 4.816609 | 15.99114188 | candidate division TM6 bacterium Zodletone_IIa | 1511133 | Bacteria | Bacteria | 167 | 3.14e-51 | NR | KHD90133.1 | 1511133 | g28979 | i0 | 100 | 1.42771084337349 | 79 | 0 | 71.4 | 0 | 94 | 330 | 1 | 79 | KHD90133.1 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase, partial [candidate division TM6 bacterium Zodletone_IIa] | diamond | 474 | 167 | 1 | Bacteria | Bacteria candidate phyla | candidate division TM6 bacterium Zodletone_IIa | |||||||
| 32462986 | 32462986 | PRJNA1241156_S_NODE_53599_length_267_cov_4.843750_g53139_i0 | PRJNA1241156 | 53599 | 267 | 4.84375 | 12.9328125 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 43.5 | 0.00381 | NR | MEX0597906.1 | 2053589 | g53139 | i0 | 36.5 | 1.08988764044944 | 52 | 33 | 58.4 | 0 | 13 | 168 | 16 | 67 | MEX0597906.1 hypothetical protein [Candidatus Paceibacterota bacterium] | diamond | 291 | 43.5 | 1 | Bacteria | Bacteria candidate phyla | Minisyncoccota | Minisyncoccota bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;