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contig_metadata

16 rows where bioproject = "PRJNA1240805" and tax_phylum = "Pisuviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 16 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1240805 · 16 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
349282 349282 PRJNA1240805_P_NODE_1801_length_361_cov_5.589744_g1752_i0 PRJNA1240805 1801 361 5.589744 20.17897584 Dolerus tritici iflavirus 1 3350209 Viruses Viruses 54.7 0.01   NTclustered gi|2833733277|gb|PQ323359.2| 3350209 g1752 i0 100 0.0803324099722992 29 0 8 0 1 29 58 86 Dolerus tritici iflavirus 1 isolate HN-WS polyprotein gene, complete cds blastn 29 54.7 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Dolerus tritici iflavirus 1
349334 349334 PRJNA1240805_P_NODE_5561_length_193_cov_6.111111_g5512_i0 PRJNA1240805 5561 193 6.111111 11.79444423 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.005   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g5512 i0 100 0.150259067357513 29 0 15 0 165 193 44 16 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 29 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
13103295 13103295 PRJNA1240805_P_NODE_5971_length_187_cov_4.268116_g5922_i0 PRJNA1240805 5971 187 4.268116 7.98137692 Blacklegged tick picorna-like virus 2 2080259 Viruses Viruses 283 5.209999999999999e-72   NTclustered gi|1338075553|gb|MG647772.1| 2080259 g5922 i0 97.59 7.61497326203209 166 3 88 1 1 165 368 203 Blacklegged tick picorna-like virus 2 isolate RTS-11.3 hypothetical protein gene, partial cds blastn 1424 283 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Blacklegged tick picorna-like virus 2
18201181 18201181 PRJNA1240805_P_NODE_4715_length_210_cov_13.832298_g4666_i0 PRJNA1240805 4715 210 13.832298 29.0478258 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 331 2.11e-86   NTclustered gi|2754692002|gb|PP872741.1| 3003959 g4666 i0 98.404 0.895238095238095 188 3 90 0 17 204 8443 8630 MAG: Picornavirales sp. isolate TC-PLV-185 MR233-17E/652 genomic sequence blastn 188 331 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
18902027 18902027 PRJNA1240805_P_NODE_4835_length_208_cov_3.245283_g4786_i0 PRJNA1240805 4835 208 3.245283 6.75018864 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 73.2 4.52e-13   NR XCM68067.1 3003959 g4786 i0 48.3 0.865384615384615 60 31 86.5 0 181 2 1030 1089 XCM68067.1 MAG: nonstructural polyprotein [Picornavirales sp.] diamond 180 73.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
19475513 19475513 PRJNA1240805_P_NODE_6816_length_175_cov_12.674603_g6767_i0 PRJNA1240805 6816 175 12.674603 22.18055525 Marnaviridae sp. 2715102 Viruses Viruses 65.8 1.89e-6   NTclustered gi|2196309042|gb|MZ679248.1| 2715102 g6767 i0 78.182 0.628571428571429 110 18 61 5 38 144 1216 1110 MAG: Marnaviridae sp. isolate R65-k141_733993 hypothetical protein gene, complete cds blastn 110 65.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Marnaviridae   Marnaviridae sp.
22026218 22026218 PRJNA1240805_P_NODE_5818_length_189_cov_6.978571_g5769_i0 PRJNA1240805 5818 189 6.978571 13.18949919 Sobemovirus sp. 2809869 Viruses Viruses 95.3 2.66e-15   NTclustered gi|2171145024|gb|MZ218240.1| 2809869 g5769 i0 78.205 102.148148148148 156 28 81 6 9 162 5309 5158 MAG: Sobemovirus sp. isolate 267-k141_60134 genomic sequence blastn 19306 95.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales Solemoviridae Sobemovirus Sobemovirus sp.
27484358 27484358 PRJNA1240805_P_NODE_3303_length_256_cov_6.120773_g3254_i0 PRJNA1240805 3303 256 6.120773 15.66917888 Qianjiang marna-like virus 187 3347615 Viruses Viruses 43.5 0.0236   NR XHA88380.1 3347615 g3254 i0 50 0.5390625 46 21 51.6 2 29 160 113 158 XHA88380.1 MAG: polyprotein, partial [Qianjiang marna-like virus 187] diamond 138 43.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Marnaviridae   Qianjiang marna-like virus 187
27881319 27881319 PRJNA1240805_P_NODE_3525_length_246_cov_5.365482_g3476_i0 PRJNA1240805 3525 246 5.365482 13.19908572 Viruses 10239 Viruses Viruses 147 4.2599999999999996e-39   NR URG14989.1 1530251 g3476 i0 84 6.85365853658537 81 13 98.8 0 4 246 231 311 URG14989.1 MAG: RNA dependent RNA polymerase, partial [Picornaviridae sp.] diamond 1686 147 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.
29473241 29473241 PRJNA1240805_P_NODE_8350_length_161_cov_2.383929_g8301_i0 PRJNA1240805 8350 161 2.383929 3.83812569 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 45.8 0.001   NR XCM68156.1 3003959 g8301 i0 62.2 0.68944099378882 37 14 68.9 0 8 118 75 111 XCM68156.1 MAG: hypothetical protein, partial [Picornavirales sp.] diamond 111 45.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
29536671 29536671 PRJNA1240805_P_NODE_5510_length_194_cov_7.317241_g5461_i0 PRJNA1240805 5510 194 7.317241 14.19544754 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 63.9 6.56e-10   NR XCM68232.1 3003959 g5461 i0 50 1.79381443298969 58 29 89.7 0 13 186 984 1041 XCM68232.1 MAG: nonstructural polyprotein, partial [Picornavirales sp.] diamond 348 63.9 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
29568149 29568149 PRJNA1240805_P_NODE_4710_length_210_cov_35.956522_g4661_i0 PRJNA1240805 4710 210 35.956522 75.5086962 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 67.8 3.73e-11   NR XCM67722.1 3003959 g4661 i0 69 0.6 42 13 60 0 25 150 1808 1849 XCM67722.1 MAG: nonstructural polyprotein [Picornavirales sp.] diamond 126 67.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
31179103 31179103 PRJNA1240805_P_NODE_6655_length_177_cov_7.500000_g6606_i0 PRJNA1240805 6655 177 7.5 13.275 Marnaviridae sp. 2715102 Viruses Viruses 79.3 2e-15   NR ULF99969.1 2715102 g6606 i0 72.5 0.864406779661017 51 14 86.4 0 153 1 194 244 ULF99969.1 MAG: hypothetical protein 1 [Marnaviridae sp.] diamond 153 79.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Marnaviridae   Marnaviridae sp.
31210509 31210509 PRJNA1240805_P_NODE_4255_length_222_cov_6.289017_g4206_i0 PRJNA1240805 4255 222 6.289017 13.96161774 Qianjiang dicistro-like virus 61 3347476 Viruses Viruses 66.2 1.54e-10   NR XHA87823.1 3347476 g4206 i0 74.4 0.527027027027027 39 10 52.7 0 22 138 651 689 XHA87823.1 MAG: polyprotein [Qianjiang dicistro-like virus 61] diamond 117 66.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Qianjiang dicistro-like virus 61
31717050 31717050 PRJNA1240805_P_NODE_6757_length_176_cov_3.811024_g6708_i0 PRJNA1240805 6757 176 3.811024 6.70740224 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 55.5 4.96e-7   NR QDH90548.1 3003959 g6708 i0 50 0.852272727272727 50 25 85.2 0 155 6 323 372 QDH90548.1 MAG: RNA-dependent RNA polymerase [Picornavirales sp.] diamond 150 55.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
32886005 32886005 PRJNA1240805_P_NODE_4900_length_206_cov_7.044586_g4851_i0 PRJNA1240805 4900 206 7.044586 14.51184716 Ripistuv virus 3131355 Viruses Viruses 73.6 3.18e-13   NR WZH61282.1 3131355 g4851 i0 66.7 0.742718446601942 51 17 74.3 0 155 3 1185 1235 WZH61282.1 MAG: RNA-dependent RNA polymerase, partial [Ripistuv virus] diamond 153 73.6 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Ripistuv virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;