contig_metadata
10 rows where bioproject = "PRJNA1240805" and tax_phylum = "Myxococcota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 349311 | 349311 | PRJNA1240805_P_NODE_3921_length_233_cov_9.233696_g3872_i0 | PRJNA1240805 | 3921 | 233 | 9.233696 | 21.51451168 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 272 | 1.47e-68 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g3872 | i0 | 90.047 | 143.244635193133 | 211 | 19 | 90 | 2 | 1 | 210 | 7089468 | 7089259 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 33376 | 272 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 1624134 | 1624134 | PRJNA1240805_P_NODE_6362_length_181_cov_8.522727_g6313_i0 | PRJNA1240805 | 6362 | 181 | 8.522727 | 15.42613587 | Polyangiales bacterium | 3034171 | Bacteria | Bacteria | 104 | 1.32e-25 | NR | MFO0606058.1 | 3034171 | g6313 | i0 | 88.1 | 0.977900552486188 | 59 | 7 | 97.8 | 0 | 179 | 3 | 100 | 158 | MFO0606058.1 aldo/keto reductase [Polyangiales bacterium] | diamond | 177 | 104 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiales bacterium | |||||
| 9277730 | 9277730 | PRJNA1240805_P_NODE_6928_length_174_cov_5.920000_g6879_i0 | PRJNA1240805 | 6928 | 174 | 5.92 | 10.3008 | Corallococcus macrosporus | 35 | Bacteria | Bacteria | 106 | 1.11e-18 | NTclustered | gi|1243045502|gb|CP022203.1| | 1189310 | g6879 | i0 | 79.739 | 4.26436781609195 | 153 | 25 | 86 | 6 | 23 | 172 | 3150800 | 3150651 | Corallococcus macrosporus DSM 14697 chromosome, complete genome | blastn | 742 | 106 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus macrosporus | ||
| 13103251 | 13103251 | PRJNA1240805_P_NODE_2891_length_277_cov_2.684211_g2842_i0 | PRJNA1240805 | 2891 | 277 | 2.684211 | 7.43526447 | Sandaracinus amylolyticus | 927083 | Bacteria | Bacteria | 243 | 1.41e-59 | NTclustered | gi|2183633570|gb|CP070225.1| | 927083 | g2842 | i0 | 82.734 | 4.33574007220217 | 278 | 43 | 99 | 5 | 3 | 277 | 2614950 | 2614675 | Sandaracinus strain MSr10575 (SBSa001) chromosome, complete sequence | blastn | 1201 | 243 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus amylolyticus | |||
| 27894724 | 27894724 | PRJNA1240805_P_NODE_7525_length_168_cov_3.210084_g7476_i0 | PRJNA1240805 | 7525 | 168 | 3.210084 | 5.39294112 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 98.6 | 2.77e-22 | NR | MBM4264781.1 | 2026735 | g7476 | i0 | 85.2 | 0.964285714285714 | 54 | 8 | 96.4 | 0 | 163 | 2 | 49 | 102 | MBM4264781.1 hypothetical protein [Deltaproteobacteria bacterium] | diamond | 162 | 98.6 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 27957969 | 27957969 | PRJNA1240805_P_NODE_2385_length_307_cov_4.348837_g2336_i0 | PRJNA1240805 | 2385 | 307 | 4.348837 | 13.35092959 | Minicystis sp. | 1971901 | Bacteria | Bacteria | 44.7 | 0.0163 | NR | MEO7328454.1 | 1971901 | g2336 | i0 | 34.1 | 0.801302931596091 | 82 | 44 | 79.2 | 2 | 282 | 40 | 180 | 252 | MEO7328454.1 hypothetical protein [Minicystis sp.] | diamond | 246 | 44.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Minicystis | Minicystis sp. | |||
| 29126485 | 29126485 | PRJNA1240805_P_NODE_3649_length_242_cov_3.113990_g3600_i0 | PRJNA1240805 | 3649 | 242 | 3.11399 | 7.5358558 | Kofleriaceae bacterium | 2212474 | Bacteria | Bacteria | 42 | 0.0296 | NR | HEY0990064.1 | 2212474 | g3600 | i0 | 36.5 | 0.78099173553719 | 63 | 39 | 78.1 | 1 | 13 | 201 | 64 | 125 | HEY0990064.1 hypothetical protein [Kofleriaceae bacterium] | diamond | 189 | 42 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Kofleriaceae bacterium | ||||
| 30010541 | 30010541 | PRJNA1240805_P_NODE_2911_length_275_cov_9.800885_g2862_i0 | PRJNA1240805 | 2911 | 275 | 9.800885 | 26.95243375 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 58.5 | 5.49e-9 | NR | MBT3716708.1 | 2026735 | g2862 | i0 | 39.7 | 2.74909090909091 | 68 | 41 | 74.2 | 0 | 252 | 49 | 11 | 78 | MBT3716708.1 hypothetical protein [Deltaproteobacteria bacterium] | diamond | 756 | 58.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 31369375 | 31369375 | PRJNA1240805_P_NODE_5076_length_203_cov_2.116883_g5027_i0 | PRJNA1240805 | 5076 | 203 | 2.116883 | 4.29727249 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 78.2 | 7.11e-15 | NR | MBK9265096.1 | 2268199 | g5027 | i0 | 54.7 | 7.61083743842365 | 64 | 29 | 94.6 | 0 | 192 | 1 | 700 | 763 | MBK9265096.1 DUF4215 domain-containing protein [Polyangiaceae bacterium] | diamond | 1545 | 78.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 31400961 | 31400961 | PRJNA1240805_P_NODE_4816_length_208_cov_9.238994_g4767_i0 | PRJNA1240805 | 4816 | 208 | 9.238994 | 19.21710752 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 116 | 9.739999999999999e-30 | NR | MBM4304688.1 | 2026735 | g4767 | i0 | 69.4 | 1.03846153846154 | 72 | 19 | 99.5 | 1 | 208 | 2 | 236 | 307 | MBM4304688.1 hypothetical protein [Deltaproteobacteria bacterium] | diamond | 216 | 116 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;