RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA1240805" and tax_phylum = "Duplornaviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1240805 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11828096 11828096 PRJNA1240805_P_NODE_3390_length_252_cov_4.507389_g3341_i0 PRJNA1240805 3390 252 4.507389 11.35862028 Seadornavirus kadipiroense 3241299 Viruses Viruses 425 1.17e-114   NTclustered gi|2083529913|tpd|BR001721.1| 104580 g3341 i0 100 1.82539682539683 230 0 91 0 23 252 921 692 TPA_asm: Kadipiro virus rat/2019/410 RdRp gene for RNA-dependent RNA polymerase, partial cds blastn 460 425 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Seadornavirus Seadornavirus kadipiroense
22026235 22026235 PRJNA1240805_P_NODE_7258_length_171_cov_2.213115_g7209_i0 PRJNA1240805 7258 171 2.213115 3.78442665 Seadornavirus kadipiroense 3241299 Viruses Viruses 316 4.6e-82   NTclustered gi|2083529923|tpd|BR001726.1| 104580 g7209 i0 100 1 171 0 100 0 1 171 378 548 TPA_asm: Kadipiro virus rat/2019/399 gene for VP6 protein, complete cds blastn 171 316 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Seadornavirus Seadornavirus kadipiroense
24575765 24575765 PRJNA1240805_P_NODE_4460_length_216_cov_22.155689_g4411_i0 PRJNA1240805 4460 216 22.155689 47.85628824 Seadornavirus kadipiroense 3241299 Viruses Viruses 363 7.749999999999998e-96   NTclustered gi|2083529919|tpd|BR001724.1| 104580 g4411 i0 99.497 2.72222222222222 199 1 92 0 1 199 1277 1079 TPA_asm: Kadipiro virus rat/2019/395 gene for VP4 protein, complete cds blastn 588 363 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Seadornavirus Seadornavirus kadipiroense

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;