RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA1240805" and tax_phylum = "Candidatus Doudnaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Doudnaibacteriota · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA1240805 · 6 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2325887 2325887 PRJNA1240805_P_NODE_902_length_527_cov_12.271967_g855_i0 PRJNA1240805 902 527 12.271967 64.67326609 Candidatus Doudnabacteria bacterium 2052150 Bacteria Bacteria 310 1.4699999999999993e-96   NR MDR3643410.1 2052150 g855 i0 84.6 6.96774193548387 175 27 99.6 0 1 525 14 188 MDR3643410.1 excinuclease ABC subunit UvrA [Candidatus Doudnabacteria bacterium] diamond 3672 310 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium
24575778 24575778 PRJNA1240805_P_NODE_5460_length_195_cov_6.965753_g5411_i0 PRJNA1240805 5460 195 6.965753 13.58321835 Candidatus Doudnabacteria bacterium 2052150 Bacteria Bacteria 89.4 4.74e-20   NR MBL8031197.1 2052150 g5411 i0 74.5 1.70769230769231 55 14 84.6 0 25 189 5 59 MBL8031197.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Candidatus Doudnabacteria bacterium] diamond 333 89.4 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium
27944562 27944562 PRJNA1240805_P_NODE_5325_length_198_cov_1.624161_g5276_i0 PRJNA1240805 5325 198 1.624161 3.21583878 Bacteria 2 Bacteria Bacteria 84.3 5.64e-18   NR MCC7356801.1 2052150 g5276 i0 70.9 1.63636363636364 55 16 83.3 0 166 2 101 155 MCC7356801.1 hypothetical protein [Candidatus Doudnabacteria bacterium] diamond 324 84.3 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium
29283897 29283897 PRJNA1240805_P_NODE_6089_length_185_cov_4.647059_g6040_i0 PRJNA1240805 6089 185 4.647059 8.59705915 Candidatus Doudnabacteria bacterium 2052150 Bacteria Bacteria 90.5 2.55e-19   NR MBI5530819.1 2052150 g6040 i0 74.1 5.25405405405405 54 14 87.6 0 24 185 329 382 MBI5530819.1 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein [Candidatus Doudnabacteria bacterium] diamond 972 90.5 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium
31305822 31305822 PRJNA1240805_P_NODE_875_length_536_cov_3.798768_g828_i0 PRJNA1240805 875 536 3.798768 20.36139648 Candidatus Doudnabacteria bacterium 2052150 Bacteria Bacteria 86.3 4.74e-16   NR MBP9686811.1 2052150 g828 i0 84.8 2.82649253731343 46 7 25.7 0 22 159 442 487 MBP9686811.1 ABC-F family ATP-binding cassette domain-containing protein [Candidatus Doudnabacteria bacterium] diamond 1515 86.3 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium
31653620 31653620 PRJNA1240805_P_NODE_5537_length_194_cov_1.841379_g5488_i0 PRJNA1240805 5537 194 1.841379 3.57227526 Candidatus Doudnabacteria bacterium 2052150 Bacteria Bacteria 52.8 2.33e-6   NR MCX6797255.1 2052150 g5488 i0 45 0.927835051546392 60 32 92.8 1 8 187 21 79 MCX6797255.1 restriction endonuclease [Candidatus Doudnabacteria bacterium] diamond 180 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;