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contig_metadata

22 rows where bioproject = "PRJNA1240805", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 22 ✖

tax_phylum 1

  • Acidobacteriota · 22 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1240805 · 22 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1624079 1624079 PRJNA1240805_P_NODE_1702_length_374_cov_2.495385_g1653_i0 PRJNA1240805 1702 374 2.495385 9.3327399 Bryobacterales bacterium 2026791 Bacteria Bacteria 215 1.22e-63   NR HBY62940.1 2026791 g1653 i0 83.5 4.99732620320856 127 14 96.3 1 374 15 207 333 HBY62940.1 hypothetical protein [Bryobacterales bacterium] diamond 1869 215 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
2900287 2900287 PRJNA1240805_P_NODE_5043_length_203_cov_12.311688_g4994_i0 PRJNA1240805 5043 203 12.311688 24.99272664 Pseudomonadati 3379134 Bacteria Bacteria 87 5.49e-18   NR MDQ6893965.1 1978231 g4994 i0 67.2 10.9064039408867 64 14 94.6 1 6 197 694 750 MDQ6893965.1 glucosidase [Acidobacteriota bacterium] diamond 2214 87 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
5452939 5452939 PRJNA1240805_P_NODE_5285_length_198_cov_7.624161_g5236_i0 PRJNA1240805 5285 198 7.624161 15.09583878 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 202 1.61e-47   NTclustered gi|217038899|gb|EU810989.1| 171953 g5236 i0 94.615 78.459595959596 130 7 66 0 69 198 1 130 Uncultured Acidobacteria bacterium clone 01QD9 23S ribosomal RNA gene, partial sequence blastn 15535 202 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
5452965 5452965 PRJNA1240805_P_NODE_7005_length_173_cov_14.354839_g6956_i0 PRJNA1240805 7005 173 14.354839 24.83387147 Bacteria 2 Bacteria Bacteria 109 4.11e-26   NR MBI2685908.1 1978231 g6956 i0 89.3 7.50867052023121 56 6 97.1 0 169 2 163 218 MBI2685908.1 acido-empty-quinoprotein group A [Acidobacteriota bacterium] diamond 1299 109 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
8002737 8002737 PRJNA1240805_P_NODE_3367_length_253_cov_4.558824_g3318_i0 PRJNA1240805 3367 253 4.558824 11.53382472 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 128 3.85e-32   NR NWF82534.1 2212468 g3318 i0 73.4 0.936758893280632 79 21 93.7 0 1 237 279 357 NWF82534.1 TonB-dependent receptor [Bryobacteraceae bacterium] diamond 237 128 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
9978593 9978593 PRJNA1240805_P_NODE_8228_length_162_cov_1.805310_g8179_i0 PRJNA1240805 8228 162 1.80531 2.9246022 Pseudomonadati 3379134 Bacteria Bacteria 71.3 3.72e-8   NTclustered gi|2874253836|emb|OY969886.1| 171953 g8179 i0 95.455 1.6358024691358 44 2 27 0 110 153 888373 888330 MAG: uncultured Acidobacteriota bacterium isolate MFD10007.bin.c.1 genome assembly, chromosome: 1 blastn 265 71.3 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
10553468 10553468 PRJNA1240805_P_NODE_1369_length_424_cov_4.376000_g1320_i0 PRJNA1240805 1369 424 4.376 18.55424 Bryobacterales bacterium 2026791 Bacteria Bacteria 238 8.38e-74   NR MBL8209980.1 2026791 g1320 i0 86.9 0.969339622641509 137 18 96.9 0 9 419 140 276 MBL8209980.1 quinohemoprotein amine dehydrogenase maturation protein [Bryobacterales bacterium] diamond 411 238 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
15078082 15078082 PRJNA1240805_P_NODE_4472_length_216_cov_6.443114_g4423_i0 PRJNA1240805 4472 216 6.443114 13.91712624 Bacteria 2 Bacteria Bacteria 122 2.44e-30   NR MEP7352052.1 1978231 g4423 i0 91.4 1.95833333333333 70 6 97.2 0 2 211 463 532 MEP7352052.1 efflux RND transporter permease subunit [Acidobacteriota bacterium] diamond 423 122 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
15652422 15652422 PRJNA1240805_P_NODE_3573_length_244_cov_13.179487_g3524_i0 PRJNA1240805 3573 244 13.179487 32.15794828 Acidobacteriota bacterium 1978231 Bacteria Bacteria 296 9.21e-76   NTclustered gi|1958098837|gb|CP065005.1| 1978231 g3524 i0 90.95 96.8196721311475 221 19 91 1 1 221 4648915 4648696 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.198_cln chromosome, complete genome blastn 23624 296 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
18201162 18201162 PRJNA1240805_P_NODE_3215_length_260_cov_2.322275_g3166_i0 PRJNA1240805 3215 260 2.322275 6.037915 Acidobacteriota bacterium 1978231 Bacteria Bacteria 119 7.29e-29   NR MAM84845.1 1978231 g3166 i0 67.9 0.9 78 25 90 0 22 255 403 480 MAM84845.1 hypothetical protein [Acidobacteriota bacterium] diamond 234 119 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
19475504 19475504 PRJNA1240805_P_NODE_6036_length_186_cov_3.204380_g5987_i0 PRJNA1240805 6036 186 3.20438 5.9601468 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 207 3.21e-49   NTclustered gi|2874253692|emb|OY969418.1| 171953 g5987 i0 90 110.123655913978 160 16 86 0 1 160 4233763 4233922 MAG: uncultured Acidobacteriota bacterium isolate MFD09212.bin.c.1 genome assembly, chromosome: 1 blastn 20483 207 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
20751021 20751021 PRJNA1240805_P_NODE_8957_length_154_cov_3.266667_g8908_i0 PRJNA1240805 8957 154 3.266667 5.03066718 Acidobacteriota bacterium 1978231 Bacteria Bacteria 243 6.99e-60   NTclustered gi|1958098837|gb|CP065005.1| 1978231 g8908 i0 95.395 244.253246753247 152 7 99 0 1 152 4649311 4649462 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.198_cln chromosome, complete genome blastn 37615 243 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
23301908 23301908 PRJNA1240805_P_NODE_939_length_517_cov_8.277778_g892_i0 PRJNA1240805 939 517 8.277778 42.79611226 Bryobacter 911113 Bacteria Bacteria 207 4.78e-63   NR WP_031500241.1 360054 g892 i0 77.9 1.52030947775629 131 29 76 0 18 410 196 326 WP_031500241.1 D-alanine--D-alanine ligase family protein [Bryobacter aggregatus] diamond 786 207 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae Bryobacter Bryobacter aggregatus
26756873 26756873 PRJNA1240805_P_NODE_3781_length_238_cov_2.179894_g3732_i0 PRJNA1240805 3781 238 2.179894 5.18814772 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 131 2.05e-35   NR MEZ5403239.1 2212468 g3732 i0 85.3 1.89075630252101 75 11 94.5 0 5 229 216 290 MEZ5403239.1 aldo/keto reductase [Bryobacteraceae bacterium] diamond 450 131 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
28526485 28526485 PRJNA1240805_P_NODE_1367_length_424_cov_4.864000_g1318_i0 PRJNA1240805 1367 424 4.864 20.62336 Edaphobacter sp. 1934404 Bacteria Bacteria 80.1 1.14e-15   NR HWW24172.1 1934404 g1318 i0 38.4 0.792452830188679 112 51 78.5 3 410 78 60 154 HWW24172.1 lipocalin family protein [Edaphobacter sp.] diamond 336 80.1 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Edaphobacter Edaphobacter sp.
28702402 28702402 PRJNA1240805_P_NODE_5707_length_191_cov_3.978873_g5658_i0 PRJNA1240805 5707 191 3.978873 7.59964743 Pseudomonadati 3379134 Bacteria Bacteria 57.8 5.49e-8   NR HXF08621.1 2952895 g5658 i0 77.1 1.09947643979058 35 8 55 0 4 108 200 234 HXF08621.1 FHA domain-containing protein [Candidatus Acidiferrales bacterium] diamond 210 57.8 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales     Candidatus Acidiferrales bacterium
28747327 28747327 PRJNA1240805_P_NODE_3447_length_250_cov_2.009950_g3398_i0 PRJNA1240805 3447 250 2.00995 5.024875 Acidobacteriota bacterium 1978231 Bacteria Bacteria 132 9.81e-34   NR MBM3766664.1 1978231 g3398 i0 94.6 0.888 74 4 88.8 0 21 242 538 611 MBM3766664.1 hypothetical protein [Acidobacteriota bacterium] diamond 222 132 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29189518 29189518 PRJNA1240805_P_NODE_69_length_1480_cov_4.575122_g58_i0 PRJNA1240805 69 1480 4.575122 67.7118056 Acidobacteriota bacterium 1978231 Bacteria Bacteria 334 1.04e-108   NR MBM3761435.1 1978231 g58 i0 63.5 0.555405405405405 274 97 55.1 2 1180 365 1 273 MBM3761435.1 RluA family pseudouridine synthase [Acidobacteriota bacterium] diamond 822 334 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29757542 29757542 PRJNA1240805_P_NODE_2971_length_272_cov_15.372197_g2922_i0 PRJNA1240805 2971 272 15.372197 41.81237584 Acidobacteriota bacterium 1978231 Bacteria Bacteria 85.5 1.23e-17   NR MBI4486874.1 1978231 g2922 i0 78 1.04779411764706 50 11 55.1 0 100 249 1 50 MBI4486874.1 DUF692 domain-containing protein [Acidobacteriota bacterium] diamond 285 85.5 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29757546 29757546 PRJNA1240805_P_NODE_7471_length_169_cov_1.783333_g7422_i0 PRJNA1240805 7471 169 1.783333 3.01383277 Acidobacteriota bacterium 1978231 Bacteria Bacteria 53.1 6.86e-7   NR MCX6613524.1 1978231 g7422 i0 56.5 0.816568047337278 46 20 81.7 0 169 32 63 108 MCX6613524.1 hypothetical protein [Acidobacteriota bacterium] diamond 138 53.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30515891 30515891 PRJNA1240805_P_NODE_7893_length_165_cov_0.879310_g7844_i0 PRJNA1240805 7893 165 0.87931 1.4508615 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 75.5 2.14e-14   NR HEX3701708.1 2910147 g7844 i0 69.8 1.94545454545455 53 16 96.4 0 4 162 138 190 HEX3701708.1 AAA family ATPase [Vicinamibacterales bacterium] diamond 321 75.5 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
32350027 32350027 PRJNA1240805_P_NODE_2479_length_301_cov_9.714286_g2430_i0 PRJNA1240805 2479 301 9.714286 29.24000086 Candidatus Polarisedimenticolia bacterium 3069555 Bacteria Bacteria 174 1.97e-49   NR MEN6527600.1 3069555 g2430 i0 82.8 1.87375415282392 93 16 92.7 0 15 293 127 219 MEN6527600.1 portal protein [Candidatus Polarisedimenticolia bacterium] diamond 564 174 1 Bacteria   Pseudomonadati Acidobacteriota Candidatus Polarisedimenticolia       Candidatus Polarisedimenticolia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;