RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1240805", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1240805 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5452946 5452946 PRJNA1240805_P_NODE_5745_length_191_cov_1.436620_g5696_i0 PRJNA1240805 5745 191 1.43662 2.7439442 Stenostomum cf. simplex AW-2018 2495572 Platyhelminthes Platyhelminthes 337 4.05e-88   NTclustered gi|1532673575|gb|MH663467.1| 2495572 g5696 i0 98.438 11.2722513089005 192 2 100 1 1 191 393 584 Stenostomum cf. simplex AW-2018 16S ribosomal RNA gene, partial sequence; mitochondrial blastn 2153 337 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum cf. simplex AW-2018
6727308 6727308 PRJNA1240805_P_NODE_7086_length_173_cov_1.701613_g7037_i0 PRJNA1240805 7086 173 1.701613 2.94379049 Stenostomum cf. simplex AW-2018 2495572 Platyhelminthes Platyhelminthes 320 3.61e-83   NTclustered gi|1532673575|gb|MH663467.1| 2495572 g7037 i0 100 11.271676300578 173 0 100 0 1 173 708 880 Stenostomum cf. simplex AW-2018 16S ribosomal RNA gene, partial sequence; mitochondrial blastn 1950 320 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum cf. simplex AW-2018

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;