contig_metadata
4 rows where bioproject = "PRJNA1240805", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4176592 | 4176592 | PRJNA1240805_P_NODE_3584_length_244_cov_3.917949_g3535_i0 | PRJNA1240805 | 3584 | 244 | 3.917949 | 9.55979556 | Candidatus Rhabdochlamydia oedothoracis | 2720720 | Bacteria | Bacteria | 278 | 3.34e-70 | NTclustered | gi|2076407543|gb|CP075587.1| | 2720720 | g3535 | i0 | 90.323 | 97.8032786885246 | 217 | 13 | 89 | 5 | 24 | 239 | 1317785 | 1317576 | Candidatus Rhabdochlamydia oedothoracis isolate W744xW776 chromosome, complete genome | blastn | 23864 | 278 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Rhabdochlamydiaceae | Candidatus Rhabdochlamydia | Candidatus Rhabdochlamydia oedothoracis | |
| 8703354 | 8703354 | PRJNA1240805_P_NODE_6167_length_184_cov_3.333333_g6118_i0 | PRJNA1240805 | 6167 | 184 | 3.333333 | 6.13333272 | Parachlamydia | 83551 | Bacteria | Bacteria | 183 | 5.329999999999998e-42 | NTclustered | gi|1491674|emb|Y07555.1| | 83552 | g6118 | i0 | 87.654 | 16.2771739130435 | 162 | 15 | 87 | 5 | 22 | 181 | 1197 | 1355 | Parachlamydia acanthamoebae genomic LSU rRNA | blastn | 2995 | 183 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydia | Parachlamydia acanthamoebae | |
| 27926392 | 27926392 | PRJNA1240805_P_NODE_7965_length_164_cov_2.191304_g7916_i0 | PRJNA1240805 | 7965 | 164 | 2.191304 | 3.59373856 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 68.9 | 7.25e-12 | NR | MFI5333753.1 | 2047757 | g7916 | i0 | 66 | 0.914634146341463 | 50 | 16 | 91.5 | 1 | 9 | 158 | 184 | 232 | MFI5333753.1 glycogen synthase [Chlamydiales bacterium] | diamond | 150 | 68.9 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 28778786 | 28778786 | PRJNA1240805_P_NODE_3247_length_258_cov_29.612440_g3198_i0 | PRJNA1240805 | 3247 | 258 | 29.61244 | 76.4000952 | Rhabdochlamydiaceae bacterium | 2047756 | Bacteria | Bacteria | 144 | 6.72e-38 | NR | MBY0530222.1 | 2047756 | g3198 | i0 | 71.8 | 0.988372093023256 | 85 | 24 | 98.8 | 0 | 255 | 1 | 1023 | 1107 | MBY0530222.1 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase [Rhabdochlamydiaceae bacterium] | diamond | 255 | 144 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Rhabdochlamydiaceae | Rhabdochlamydiaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;