RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1240805" and tax_clade = "Luna-1 subcluster"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Luna-1 subcluster · 3 ✖

bioproject 1

  • PRJNA1240805 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2325850 2325850 PRJNA1240805_P_NODE_4122_length_226_cov_14.853107_g4073_i0 PRJNA1240805 4122 226 14.853107 33.56802182 Aquiluna 529881 Bacteria Bacteria 357 3.81e-94   NTclustered gi|1850312474|gb|CP054056.1| 2499157 g4073 i0 98.515 161.955752212389 202 3 89 0 25 226 855088 855289 Aquiluna borgnonia strain 15G-AUS-rot chromosome, complete genome blastn 36602 357 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Aquiluna Aquiluna borgnonia
8002778 8002778 PRJNA1240805_P_NODE_6207_length_183_cov_29.291045_g6158_i0 PRJNA1240805 6207 183 29.291045 53.60261235 Aquiluna sp. KACHI24 2968831 Bacteria Bacteria 279 6.57e-71   NTclustered gi|2283401075|dbj|AP026677.1| 2968831 g6158 i0 98.137 123.459016393443 161 2 87 1 24 183 477091 477251 Aquiluna sp. KACHI24 DNA, complete genome blastn 22593 279 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Aquiluna Aquiluna sp. KACHI24
14378483 14378483 PRJNA1240805_P_NODE_3632_length_242_cov_14.948187_g3583_i0 PRJNA1240805 3632 242 14.948187 36.17461254 Aquiluna borgnonia 2499157 Bacteria Bacteria 385 1.89e-102   NTclustered gi|1850312474|gb|CP054056.1| 2499157 g3583 i0 98.19 249.702479338843 221 3 91 1 1 220 856238 856458 Aquiluna borgnonia strain 15G-AUS-rot chromosome, complete genome blastn 60428 385 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Aquiluna Aquiluna borgnonia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;