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contig_metadata

8 rows where bioproject = "PRJNA1240804", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 8 ✖

tax_phylum 1

  • Thermoproteota · 8 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1240804 · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1622314 1622314 PRJNA1240804_P_NODE_18882_length_319_cov_1.048148_g18516_i0 PRJNA1240804 18882 319 1.048148 3.34359212 Pyrobaculum ferrireducens 1104324 Archaea Archaea 555 1.8699999999999994e-153   NTclustered gi|998226786|ref|NR_134837.2| 1104324 g18516 i0 99.032 96.4012539184953 310 2 97 1 11 319 1371 1062 Pyrobaculum ferrireducens strain 1860 16S ribosomal RNA, complete sequence blastn 30752 555 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum Pyrobaculum ferrireducens
13803318 13803318 PRJNA1240804_P_NODE_120631_length_167_cov_0.881356_g120265_i0 PRJNA1240804 120631 167 0.881356 1.47186452 Archaea 2157 Archaea Archaea 187 3.68e-43   NTclustered gi|42557759|emb|AJ627422.1| 29281 g120265 i0 88.816 12.9041916167665 152 17 91 0 5 156 41021 40870 Uncultured crenarchaeote genomic fragment 54d9 blastn 2155 187 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
17627923 17627923 PRJNA1240804_P_NODE_37654_length_243_cov_1.860825_g37288_i0 PRJNA1240804 37654 243 1.860825 4.52180475 root 1 Root_unresolved Root_unresolved 420 5.21e-113   NTclustered gi|218751468|emb|FM897366.1| 29281 g37288 i0 100 93.4156378600823 227 0 93 0 3 229 244 18 Uncultured crenarchaeote partial 16S rRNA gene, clone JG35U2A-TR-Ar57 blastn 22700 420 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
25276236 25276236 PRJNA1240804_P_NODE_17020_length_332_cov_1.438163_g16655_i0 PRJNA1240804 17020 332 1.438163 4.77470116 root 1 Root_unresolved Root_unresolved 497 3.34e-136   NTclustered gi|373125855|gb|JN567036.1| 29281 g16655 i0 99.273 84.8373493975904 275 2 83 0 47 321 737 463 Uncultured crenarchaeote clone DDOUBD11 16S ribosomal RNA gene, partial sequence blastn 28166 501 0.992015968063872 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
28102197 28102197 PRJNA1240804_P_NODE_113365_length_168_cov_0.873950_g112999_i0 PRJNA1240804 113365 168 0.87395 1.468236 root 1 Root_unresolved Root_unresolved 55.8 2.11e-7   NR MEM0282349.1 2184738 g112999 i0 49 3.26785714285714 49 25 87.5 0 14 160 190 238 MEM0282349.1 CaiB/BaiF CoA-transferase family protein [Desulfurococcaceae archaeon] diamond 549 56.2 0.99288256227758 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae   Desulfurococcaceae archaeon
30926839 30926839 PRJNA1240804_P_NODE_84714_length_183_cov_1.544776_g84348_i0 PRJNA1240804 84714 183 1.544776 2.82694008 Sulfolobales archaeon 2268200 Archaea Archaea 91.3 2.88e-20   NR MEM0439402.1 2268200 g84348 i0 93.8 0.786885245901639 48 3 78.7 0 160 17 46 93 MEM0439402.1 DNA methyltransferase [Sulfolobales archaeon] diamond 144 91.3 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales     Sulfolobales archaeon
31653527 31653527 PRJNA1240804_P_NODE_114857_length_168_cov_0.873950_g114491_i0 PRJNA1240804 114857 168 0.87395 1.468236 Thermoproteota archaeon 2056631 Archaea Archaea 47 4.38e-4   NR MEM2930031.1 2056631 g114491 i0 64.5 0.553571428571429 31 11 55.4 0 108 16 150 180 MEM2930031.1 cellulase family glycosylhydrolase [Thermoproteota archaeon] diamond 93 47 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
32286803 32286803 PRJNA1240804_P_NODE_152739_length_158_cov_2.119266_g152373_i0 PRJNA1240804 152739 158 2.119266 3.34844028 Sulfolobus sp. E5 2200884 Archaea Archaea 89.7 2.56e-19   NR TRM73770.1 2200884 g152373 i0 100 0.892405063291139 47 0 89.2 0 143 3 376 422 TRM73770.1 acetaldehyde dehydrogenase [Sulfolobus sp. E5] diamond 141 89.7 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Sulfolobus Sulfolobus sp. E5

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;