RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1240804", tax_phylum = "Candidatus Micrarchaeota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Candidatus Micrarchaeota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1240804 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26630363 26630363 PRJNA1240804_P_NODE_31221_length_262_cov_1.286385_g30855_i0 PRJNA1240804 31221 262 1.286385 3.3703287 Candidatus Micrarchaeaceae archaeon 2953041 Archaea Archaea 161 4.27e-47   NR HUC42166.1 2953041 g30855 i0 91.9 0.984732824427481 86 7 98.5 0 258 1 24 109 HUC42166.1 alpha/beta fold hydrolase [Candidatus Micrarchaeaceae archaeon] diamond 258 161 1 Archaea   Nanobdellati Candidatus Micrarchaeota Candidatus Micrarchaeia Candidatus Micrarchaeales Candidatus Micrarchaeaceae   Candidatus Micrarchaeaceae archaeon
30326786 30326786 PRJNA1240804_P_NODE_140112_length_164_cov_0.747826_g139746_i0 PRJNA1240804 140112 164 0.747826 1.22643464 Candidatus Bilamarchaeaceae archaeon 2886391 Archaea Archaea 52.4 4.88e-6   NR MEM4360379.1 2886391 g139746 i0 53.1 0.896341463414634 49 23 89.6 0 17 163 143 191 MEM4360379.1 aldo/keto reductase [Candidatus Bilamarchaeaceae archaeon] diamond 147 52.4 1 Archaea   Nanobdellati Candidatus Micrarchaeota Candidatus Micrarchaeia Candidatus Anstonellales Candidatus Bilamarchaeaceae   Candidatus Bilamarchaeaceae archaeon
30642111 30642111 PRJNA1240804_P_NODE_88533_length_181_cov_1.075758_g88167_i0 PRJNA1240804 88533 181 1.075758 1.94712198 Candidatus Micrarchaeaceae archaeon 2953041 Archaea Archaea 76.3 2.77e-15   NR HUC42167.1 2953041 g88167 i0 74.5 0.845303867403315 51 10 79.6 1 2 145 102 152 HUC42167.1 TetR/AcrR family transcriptional regulator [Candidatus Micrarchaeaceae archaeon] diamond 153 76.3 1 Archaea   Nanobdellati Candidatus Micrarchaeota Candidatus Micrarchaeia Candidatus Micrarchaeales Candidatus Micrarchaeaceae   Candidatus Micrarchaeaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;