contig_metadata
2 rows where bioproject = "PRJNA1240804" and tax_phylum = "Candidatus Berkelbacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27502619 | 27502619 | PRJNA1240804_P_NODE_112043_length_168_cov_1.621849_g111677_i0 | PRJNA1240804 | 112043 | 168 | 1.621849 | 2.72470632 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 46.2 | 8.01e-4 | NR | OGD60932.1 | 1797468 | g111677 | i0 | 63.6 | 3.39285714285714 | 33 | 12 | 58.9 | 0 | 66 | 164 | 77 | 109 | OGD60932.1 MAG: preprotein translocase subunit SecA [Candidatus Berkelbacteria bacterium RIFCSPHIGHO2_01_FULL_50_36] | diamond | 570 | 46.2 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Berkelbacteria | Candidatus Berkelbacteria bacterium RIFCSPHIGHO2_01_FULL_50_36 | ||||||
| 30136293 | 30136293 | PRJNA1240804_P_NODE_125772_length_166_cov_0.888889_g125406_i0 | PRJNA1240804 | 125772 | 166 | 0.888889 | 1.47555574 | Candidatus Berkelbacteria bacterium | 2053521 | Bacteria | Bacteria | 51.6 | 9.91e-6 | NR | MBI4948155.1 | 2053521 | g125406 | i0 | 82.8 | 2.09638554216867 | 29 | 5 | 52.4 | 0 | 165 | 79 | 639 | 667 | MBI4948155.1 HAD-IC family P-type ATPase [Candidatus Berkelbacteria bacterium] | diamond | 348 | 51.6 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Berkelbacteria | Candidatus Berkelbacteria bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;