RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1240804" and tax_phylum = "Candidatus Absconditibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Absconditibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1240804 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6725068 6725068 PRJNA1240804_P_NODE_130526_length_165_cov_0.896552_g130160_i0 PRJNA1240804 130526 165 0.896552 1.4793108 candidate division SR1 bacterium Aalborg_AAW-1 1643353 Bacteria Bacteria 263 5.86e-66   NTclustered gi|821340791|gb|CP011268.1| 1643353 g130160 i0 98.013 0.915151515151515 151 3 92 0 1 151 950529 950379 Candidate division SR1 bacterium Aalborg_AAW-1 chromosome, complete genome blastn 151 263 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium Aalborg_AAW-1
10552451 10552451 PRJNA1240804_P_NODE_49549_length_220_cov_0.818713_g49183_i0 PRJNA1240804 49549 220 0.818713 1.8011686 candidate division SR1 bacterium RAAC1_SR1_1 1394709 Bacteria Bacteria 211 3.04e-50   NTclustered gi|563351663|gb|CP006913.1| 1394709 g49183 i0 85.714 333.663636363636 203 26 91 3 15 215 125407 125608 Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome blastn 73406 211 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium RAAC1_SR1_1
14376839 14376839 PRJNA1240804_P_NODE_22292_length_299_cov_1.264000_g21926_i0 PRJNA1240804 22292 299 1.264 3.77936 candidate division SR1 bacterium RAAC1_SR1_1 1394709 Bacteria Bacteria 165 3.4200000000000003e-36   NTclustered gi|563351663|gb|CP006913.1| 1394709 g21926 i0 83.333 7.65217391304348 180 28 60 2 121 299 126171 126349 Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome blastn 2288 165 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium RAAC1_SR1_1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;