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contig_metadata

20 rows where bioproject = "PRJNA1240804" and tax_kingdom = "Thermoproteati"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 20 ✖

bioproject 1

  • PRJNA1240804 · 20 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1622314 1622314 PRJNA1240804_P_NODE_18882_length_319_cov_1.048148_g18516_i0 PRJNA1240804 18882 319 1.048148 3.34359212 Pyrobaculum ferrireducens 1104324 Archaea Archaea 555 1.8699999999999994e-153   NTclustered gi|998226786|ref|NR_134837.2| 1104324 g18516 i0 99.032 96.4012539184953 310 2 97 1 11 319 1371 1062 Pyrobaculum ferrireducens strain 1860 16S ribosomal RNA, complete sequence blastn 30752 555 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum Pyrobaculum ferrireducens
8001569 8001569 PRJNA1240804_P_NODE_41967_length_233_cov_2.467391_g41601_i0 PRJNA1240804 41967 233 2.467391 5.74902103 Candidatus Nitrosocosmicus hydrocola 1826872 Archaea Archaea 405 1.39e-108   NTclustered gi|1100598057|gb|CP017922.1| 1826872 g41601 i0 100 26.3991416309013 219 0 94 0 1 219 1790464 1790246 Candidatus Nitrosocosmicus hydrocola strain G61, complete genome blastn 6151 405 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus hydrocola
10552623 10552623 PRJNA1240804_P_NODE_58149_length_207_cov_2.063291_g57783_i0 PRJNA1240804 58149 207 2.063291 4.27101237 Candidatus Nitrosocosmicus hydrocola 1826872 Archaea Archaea 344 2.67e-90   NTclustered gi|1100598057|gb|CP017922.1| 1826872 g57783 i0 98.958 13.9710144927536 192 2 93 0 15 206 1792025 1792216 Candidatus Nitrosocosmicus hydrocola strain G61, complete genome blastn 2892 344 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus hydrocola
13803318 13803318 PRJNA1240804_P_NODE_120631_length_167_cov_0.881356_g120265_i0 PRJNA1240804 120631 167 0.881356 1.47186452 Archaea 2157 Archaea Archaea 187 3.68e-43   NTclustered gi|42557759|emb|AJ627422.1| 29281 g120265 i0 88.816 12.9041916167665 152 17 91 0 5 156 41021 40870 Uncultured crenarchaeote genomic fragment 54d9 blastn 2155 187 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
14378211 14378211 PRJNA1240804_P_NODE_87932_length_181_cov_1.454545_g87566_i0 PRJNA1240804 87932 181 1.454545 2.63272645 Candidatus Nitrosocosmicus hydrocola 1826872 Archaea Archaea 305 1.07e-78   NTclustered gi|1100598057|gb|CP017922.1| 1826872 g87566 i0 100 8.1491712707182309 165 0 91 0 15 179 1790848 1791012 Candidatus Nitrosocosmicus hydrocola strain G61, complete genome blastn 1475 305 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus hydrocola
16352442 16352442 PRJNA1240804_P_NODE_137933_length_164_cov_0.904348_g137567_i0 PRJNA1240804 137933 164 0.904348 1.48313072 Nitrososphaera 497726 Archaea Archaea 252 1.26e-62   NTclustered gi|300521484|gb|GU797787.1| 497727 g137567 i0 95 41.609756097561 160 8 98 0 5 164 1693 1852 Candidatus Nitrososphaera gargensis 23S ribosomal RNA gene, partial sequence blastn 6824 252 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Candidatus Nitrososphaera gargensis
17627923 17627923 PRJNA1240804_P_NODE_37654_length_243_cov_1.860825_g37288_i0 PRJNA1240804 37654 243 1.860825 4.52180475 root 1 Root_unresolved Root_unresolved 420 5.21e-113   NTclustered gi|218751468|emb|FM897366.1| 29281 g37288 i0 100 93.4156378600823 227 0 93 0 3 229 244 18 Uncultured crenarchaeote partial 16S rRNA gene, clone JG35U2A-TR-Ar57 blastn 22700 420 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
18901961 18901961 PRJNA1240804_P_NODE_92755_length_178_cov_1.294574_g92389_i0 PRJNA1240804 92755 178 1.294574 2.30434172 Candidatus Nitrosocosmicus 1826864 Archaea Archaea 292 8.15e-75   NTclustered gi|1100598057|gb|CP017922.1| 1826872 g92389 i0 98.78 17.4101123595506 164 2 92 0 15 178 1789689 1789852 Candidatus Nitrosocosmicus hydrocola strain G61, complete genome blastn 3099 292 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus hydrocola
25276236 25276236 PRJNA1240804_P_NODE_17020_length_332_cov_1.438163_g16655_i0 PRJNA1240804 17020 332 1.438163 4.77470116 root 1 Root_unresolved Root_unresolved 497 3.34e-136   NTclustered gi|373125855|gb|JN567036.1| 29281 g16655 i0 99.273 84.8373493975904 275 2 83 0 47 321 737 463 Uncultured crenarchaeote clone DDOUBD11 16S ribosomal RNA gene, partial sequence blastn 28166 501 0.992015968063872 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
26788775 26788775 PRJNA1240804_P_NODE_137761_length_164_cov_0.904348_g137395_i0 PRJNA1240804 137761 164 0.904348 1.48313072 Nitrososphaerota archaeon 2026795 Archaea Archaea 45.1 0.00196   NR MDE1830385.1 2026795 g137395 i0 53.7 0.75 41 18 75 1 127 5 446 485 MDE1830385.1 hypothetical protein [Nitrososphaerota archaeon] diamond 123 45.1 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
28102197 28102197 PRJNA1240804_P_NODE_113365_length_168_cov_0.873950_g112999_i0 PRJNA1240804 113365 168 0.87395 1.468236 root 1 Root_unresolved Root_unresolved 55.8 2.11e-7   NR MEM0282349.1 2184738 g112999 i0 49 3.26785714285714 49 25 87.5 0 14 160 190 238 MEM0282349.1 CaiB/BaiF CoA-transferase family protein [Desulfurococcaceae archaeon] diamond 549 56.2 0.99288256227758 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae   Desulfurococcaceae archaeon
29852380 29852380 PRJNA1240804_P_NODE_103971_length_171_cov_1.098361_g103605_i0 PRJNA1240804 103971 171 1.098361 1.87819731 Nitrososphaerales archaeon 2268197 Archaea Archaea 44.7 0.00307   NR HEY6282824.1 2268197 g103605 i0 42.3 0.912280701754386 52 30 91.2 0 7 162 732 783 HEY6282824.1 reverse transcriptase domain-containing protein [Nitrososphaerales archaeon] diamond 156 44.7 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales     Nitrososphaerales archaeon
30295090 30295090 PRJNA1240804_P_NODE_31992_length_259_cov_1.733333_g31626_i0 PRJNA1240804 31992 259 1.733333 4.48933247 Nitrososphaerales archaeon 2268197 Archaea Archaea 143 1.73e-39   NR MFI5423128.1 2268197 g31626 i0 84.6 0.903474903474903 78 12 90.3 0 14 247 25 102 MFI5423128.1 hypothetical protein [Nitrososphaerales archaeon] diamond 234 143 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales     Nitrososphaerales archaeon
30926839 30926839 PRJNA1240804_P_NODE_84714_length_183_cov_1.544776_g84348_i0 PRJNA1240804 84714 183 1.544776 2.82694008 Sulfolobales archaeon 2268200 Archaea Archaea 91.3 2.88e-20   NR MEM0439402.1 2268200 g84348 i0 93.8 0.786885245901639 48 3 78.7 0 160 17 46 93 MEM0439402.1 DNA methyltransferase [Sulfolobales archaeon] diamond 144 91.3 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales     Sulfolobales archaeon
31545563 31545563 PRJNA1240804_P_NODE_42416_length_232_cov_3.196721_g42050_i0 PRJNA1240804 42416 232 3.196721 7.41639272 root 1 Root_unresolved Root_unresolved 119 2.07e-31   NR MCI0564163.1 1971748 g42050 i0 72.6 6.55603448275862 73 20 94.4 0 231 13 67 139 MCI0564163.1 nucleoside 2-deoxyribosyltransferase [Nitrososphaera sp.] diamond 1521 119 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
31653527 31653527 PRJNA1240804_P_NODE_114857_length_168_cov_0.873950_g114491_i0 PRJNA1240804 114857 168 0.87395 1.468236 Thermoproteota archaeon 2056631 Archaea Archaea 47 4.38e-4   NR MEM2930031.1 2056631 g114491 i0 64.5 0.553571428571429 31 11 55.4 0 108 16 150 180 MEM2930031.1 cellulase family glycosylhydrolase [Thermoproteota archaeon] diamond 93 47 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
32223256 32223256 PRJNA1240804_P_NODE_147618_length_162_cov_0.920354_g147252_i0 PRJNA1240804 147618 162 0.920354 1.49097348 Nitrososphaeria archaeon 2268198 Archaea Archaea 92.4 6.560000000000001e-21   NR NDF30488.1 2268198 g147252 i0 90.4 0.962962962962963 52 5 96.3 0 157 2 21 72 NDF30488.1 hypothetical protein [Nitrososphaeria archaeon] diamond 156 92.4 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria       Nitrososphaeria archaeon
32286803 32286803 PRJNA1240804_P_NODE_152739_length_158_cov_2.119266_g152373_i0 PRJNA1240804 152739 158 2.119266 3.34844028 Sulfolobus sp. E5 2200884 Archaea Archaea 89.7 2.56e-19   NR TRM73770.1 2200884 g152373 i0 100 0.892405063291139 47 0 89.2 0 143 3 376 422 TRM73770.1 acetaldehyde dehydrogenase [Sulfolobus sp. E5] diamond 141 89.7 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Sulfolobus Sulfolobus sp. E5
32349989 32349989 PRJNA1240804_P_NODE_53399_length_214_cov_1.169697_g53033_i0 PRJNA1240804 53399 214 1.169697 2.50315158 Nitrososphaeria archaeon 2268198 Archaea Archaea 64.3 5.2e-10   NR NIM44033.1 2268198 g53033 i0 48.2 0.785046728971963 56 29 78.5 0 172 5 243 298 NIM44033.1 hypothetical protein [Nitrososphaeria archaeon] diamond 168 64.3 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria       Nitrososphaeria archaeon
32381483 32381483 PRJNA1240804_P_NODE_138779_length_164_cov_0.904348_g138413_i0 PRJNA1240804 138779 164 0.904348 1.48313072 Candidatus Nitrosocosmicus hydrocola 1826872 Archaea Archaea 93.2 1.37e-20   NR WP_148686069.1 1826872 g138413 i0 97.8 2.46951219512195 45 1 82.3 0 137 3 69 113 WP_148686069.1 metallophosphoesterase family protein [Candidatus Nitrosocosmicus hydrocola] diamond 405 93.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus hydrocola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;