RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA1240804", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1240804 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1623063 1623063 PRJNA1240804_P_NODE_51442_length_217_cov_0.904762_g51076_i0 PRJNA1240804 51442 217 0.904762 1.96333354 Tethya burtoni 2306607 Porifera other_Eukaryota 82.4 2.44e-11   NTclustered gi|1465948472|gb|MH180015.1| 2306607 g51076 i0 83.516 2.9815668202765 91 12 41 3 70 158 379 290 Tethya burtoni isolate BB255 large subunit ribosonal RNA gene, partial sequence; mitochondrial blastn 647 82.4 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Tethyida Tethyidae Tethya Tethya burtoni
30091461 30091461 PRJNA1240804_P_NODE_138772_length_164_cov_0.904348_g138406_i0 PRJNA1240804 138772 164 0.904348 1.48313072 Opisthokonta 33154 Porifera other_Eukaryota 42.4 0.0176   NR CAI8002156.1 519541 g138406 i0 48.8 3.16463414634146 41 14 75 1 143 21 446 479 CAI8002156.1 DnaJ homolog subfamily C member 3 [Geodia barretti] diamond 519 42.7 0.992974238875878 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Tetractinellida Geodiidae Geodia Geodia barretti

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;