RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1240804", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1240804 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15650261 15650261 PRJNA1240804_P_NODE_13413_length_364_cov_2.222222_g13048_i0 PRJNA1240804 13413 364 2.222222 8.08888808 Heterosporis sp. NBDP-2013a 1289055 Fungi Fungi 97.1 1.57e-15   NTclustered gi|448278458|gb|KC137554.1| 1289055 g13048 i0 82.727 0.302197802197802 110 18 30 1 209 318 2962 2854 Heterosporis sp. NBDP-2013a isolate MN/CISCO small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 110 97.1 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Heterosporis Heterosporis sp. NBDP-2013a
16352444 16352444 PRJNA1240804_P_NODE_137993_length_164_cov_0.904348_g137627_i0 PRJNA1240804 137993 164 0.904348 1.48313072 Nosematidae 27974 Fungi Fungi 276 7.46e-70   NTclustered gi|1993261390|dbj|LC467291.1| 33700 g137627 i0 100 90.9390243902439 149 0 91 0 15 163 564 712 Vairimorpha sp. BM-2012-10 gene for 18S ribosomal RNA, partial sequence blastn 14914 276 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vairimorpha Vairimorpha sp.
26788838 26788838 PRJNA1240804_P_NODE_72841_length_191_cov_1.978873_g72475_i0 PRJNA1240804 72841 191 1.978873 3.77964743 Enteropsectra breve 1912989 Fungi Fungi 45.8 3.28e-4   NR KAI5151416.1 1912989 g72475 i0 69 0.455497382198953 29 9 45.5 0 34 120 9 37 KAI5151416.1 hypothetical protein ENBRE01_2126, partial [Enteropsectra breve] diamond 87 45.8 1 Eukaryota Opisthokonta Fungi Microsporidia       Enteropsectra Enteropsectra breve

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;