RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1240804", tax_kingdom = "Bacillati" and tax_phylum = "Candidatus Dormiibacterota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJNA1240804 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10553157 10553157 PRJNA1240804_P_NODE_85169_length_183_cov_1.335821_g84803_i0 PRJNA1240804 85169 183 1.335821 2.44455243 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 91.7 2.4300000000000003e-21   NR HYL70155.1 2052315 g84803 i0 80 3.57377049180328 55 11 90.2 0 178 14 125 179 HYL70155.1 S-(hydroxymethyl)glutathione synthase [Candidatus Dormiibacterota bacterium] diamond 654 91.7 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
19473500 19473500 PRJNA1240804_P_NODE_139776_length_164_cov_0.904348_g139410_i0 PRJNA1240804 139776 164 0.904348 1.48313072 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 104 3.73e-18   NTclustered gi|2874254030|emb|OY970355.1| 2052315 g139410 i0 80 3.1890243902439 145 25 87 3 18 160 1995933 1995791 MAG: Candidatus Dormibacteraeota bacterium isolate MFD10064.bin.c.1 genome assembly, chromosome: 1 blastn 523 104 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
29884118 29884118 PRJNA1240804_P_NODE_41691_length_234_cov_1.410811_g41325_i0 PRJNA1240804 41691 234 1.410811 3.30129774 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 67.8 4.41e-11   NR HXM55033.1 2052315 g41325 i0 55.6 0.923076923076923 72 29 88.5 1 220 14 82 153 HXM55033.1 TIGR03118 family protein [Candidatus Dormiibacterota bacterium] diamond 216 67.8 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;